RNA id: TU142317



Basic Information


Item Value
RNA id TU142317
length 212
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G125356
representative True

Chromosome Information


Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 6965785 ~ 6965996 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAGCCTATTTTCAAAAAAAGTGGAGTGTTCCTTTAACCTTTCTTCATTATTTAATGTATATGTTAAATGTATGTTTAAATAAATCTGTCATGAAAACAATTTATGACGGCCACTTTGTAAATGAATATATTTAAACATTGAATTGGACTGGAGTAGAAACAGATTTAGAAGTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142316 lncRNA downstream 196 6965350 ~ 6965589 (-) True G125355
TU142274 lncRNA downstream 77628 6885162 ~ 6888157 (-) True G125315
TU142309 lncRNA downstream 83790 6881747 ~ 6881995 (-) True G125348
TU142305 lncRNA downstream 112890 6852600 ~ 6852895 (-) True G125344
TU142266 lncRNA downstream 189117 6776452 ~ 6776668 (-) True G125312
TU142279 lncRNA upstream 17633 6983629 ~ 6985603 (-) True G125318
TU142338 lncRNA upstream 63694 7029690 ~ 7031113 (-) True G125374
TU142344 lncRNA upstream 76403 7042399 ~ 7042692 (-) False G125379
TU142343 lncRNA upstream 76412 7042408 ~ 7042692 (-) True G125379
TU142395 lncRNA upstream 135689 7101685 ~ 7101920 (-) True G125425
CI01000024_06944906_06955771.mRNA mRNA downstream 10014 6943962 ~ 6955771 (-) True CI01000024_06944906_06955771
CI01000024_06909681_06921880.mRNA mRNA downstream 43905 6909322 ~ 6921880 (-) True CI01000024_06909681_06921880
CI01000024_06889558_06901776.mRNA mRNA downstream 63284 6889447 ~ 6902501 (-) True CI01000024_06889558_06901776
CI01000024_06867041_06878399.mRNA mRNA downstream 86972 6867041 ~ 6878813 (-) True CI01000024_06867041_06878399
CI01000024_06451305_06495178.mRNA mRNA downstream 467355 6451112 ~ 6498430 (-) False CI01000024_06451305_06495178
CI01000024_06987928_07001260.mRNA mRNA upstream 21460 6987456 ~ 7001358 (-) True CI01000024_06987928_07001260
CI01000024_07117698_07119483.mRNA mRNA upstream 151120 7117116 ~ 7120003 (-) True CI01000024_07117698_07119483
CI01000024_07131727_07169937.mRNA mRNA upstream 165017 7131013 ~ 7169937 (-) True CI01000024_07131727_07169937
CI01000024_07239312_07251354.mRNA mRNA upstream 271546 7237542 ~ 7251865 (-) True CI01000024_07239312_07251354
CI01000024_07293038_07298458.mRNA mRNA upstream 326853 7292849 ~ 7298458 (-) True CI01000024_07293038_07298458
TU140468 other downstream 3023861 3936042 ~ 3937057 (-) True G123701
TU139935 other downstream 4410749 2547460 ~ 2555036 (-) True G123233
TU137850 other downstream 6138934 823733 ~ 826851 (-) True G121380
TU142441 other upstream 391241 7357237 ~ 7357595 (-) False G125457
TU142437 other upstream 391709 7357705 ~ 7358104 (-) False G125457
TU142439 other upstream 391758 7357754 ~ 7358104 (-) True G125457
TU142839 other upstream 1009671 7975667 ~ 7976047 (-) False G125798

Expression Profile