RNA id: TU142839


Basic Information

Item Value
RNA id TU142839
length 381
RNA type TUCP
GC content 0.47
exon number 1
gene id G125798
representative False

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 7975667 ~ 7976047 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATAACACCTGATGTACTCGTTACATCAGAAGAAGAATGGCATCTACGCTAATATTAGTCTTTCTGTTTATCCCGAGGTTCACCGTAGTCAACCGGATCTGGGCCGTATCCAGGTGAGACCAAGGACCTGCACCTTGACACGACCACAACGCAGCCCTGAAGTATCAGCAGAGATTGAGTCAACTAGATCATCCCCTGTGAAGGCCTCATCGACACGACAGCCACGACACAGTTCCTCAACAACCGTCCATACCGGCGTGATGAATACGATCCTCAATTGGATGGAACTGAAATAAATACTTTTAATGTTGCGATCCTATTGGACTTATGATAGCAACCTGAATTGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142743 lncRNA downstream 26280 7949030 ~ 7949387 (-) True G125718
TU142758 lncRNA downstream 40110 7916804 ~ 7935557 (-) True G125722
TU142760 lncRNA downstream 59568 7905914 ~ 7916099 (-) True G125724
TU142762 lncRNA downstream 158180 7802573 ~ 7817487 (-) True G125726
TU142803 lncRNA downstream 308475 7666916 ~ 7667192 (-) True G125763
TU142843 lncRNA upstream 4811 7980858 ~ 7981094 (-) True G125801
TU142844 lncRNA upstream 6867 7982914 ~ 7983167 (-) True G125802
TU142861 lncRNA upstream 39605 8015652 ~ 8015945 (-) True G125819
TU142867 lncRNA upstream 51735 8027782 ~ 8027990 (-) True G125825
TU142869 lncRNA upstream 58262 8034309 ~ 8034634 (-) True G125827
CI01000024_07858315_07901816.mRNA mRNA downstream 73729 7858157 ~ 7901938 (-) False CI01000024_07858315_07901816
CI01000024_07847824_07855700.mRNA mRNA downstream 119326 7847573 ~ 7856341 (-) True CI01000024_07847824_07855700
CI01000024_07697986_07832289.mRNA mRNA downstream 143378 7697986 ~ 7832289 (-) True CI01000024_07697986_07832289
CI01000024_07672858_07695341.mRNA mRNA downstream 279842 7672593 ~ 7695825 (-) True CI01000024_07672858_07695341
CI01000024_07604312_07619531.mRNA mRNA downstream 356136 7604312 ~ 7619531 (-) True CI01000024_07604312_07619531
CI01000024_08161023_08259943.mRNA mRNA upstream 184243 8160290 ~ 8259943 (-) True CI01000024_08161023_08259943
CI01000024_08260814_08264845.mRNA mRNA upstream 284767 8260814 ~ 8264845 (-) True CI01000024_08260814_08264845
CI01000024_08292984_08380058.mRNA mRNA upstream 316937 8292984 ~ 8380058 (-) True CI01000024_08292984_08380058
CI01000024_08450580_08455758.mRNA mRNA upstream 474515 8450562 ~ 8457764 (-) True CI01000024_08450580_08455758
CI01000024_08460577_08479254.mRNA mRNA upstream 484422 8460469 ~ 8479690 (-) True CI01000024_08460577_08479254
TU142437 other downstream 617563 7357705 ~ 7358104 (-) False G125457
TU142439 other downstream 617563 7357754 ~ 7358104 (-) True G125457
TU142441 other downstream 618072 7357237 ~ 7357595 (-) False G125457
TU140468 other downstream 4033743 3936042 ~ 3937057 (-) True G123701
TU139935 other downstream 5420631 2547460 ~ 2555036 (-) True G123233

Expression Profile