Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000026_12203244_12209526.mRNA |
| length | 3315 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | CI01000026_12203244_12209526 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 12201358 ~ 12209698 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0021536 | diencephalon development | biological_process |
| id | description |
|---|---|
| K11988 | SHH; sonic hedgehog |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152634 | lncRNA | upstream | 4058 | 12197090 ~ 12197300 (+) | True | G134218 |
| TU152633 | lncRNA | upstream | 4600 | 12196501 ~ 12196758 (+) | True | G134217 |
| TU152631 | lncRNA | upstream | 5941 | 12195184 ~ 12195417 (+) | True | G134215 |
| TU152617 | lncRNA | upstream | 50583 | 12150519 ~ 12150775 (+) | True | G134201 |
| TU152613 | lncRNA | upstream | 57571 | 12143509 ~ 12143787 (+) | True | G134197 |
| TU152654 | lncRNA | downstream | 50249 | 12259947 ~ 12260177 (+) | True | G134238 |
| TU152594 | lncRNA | downstream | 53997 | 12263695 ~ 12303098 (+) | True | G134179 |
| TU152598 | lncRNA | downstream | 117236 | 12326934 ~ 12329825 (+) | True | G134182 |
| TU152673 | lncRNA | downstream | 163880 | 12373578 ~ 12374238 (+) | True | G134256 |
| TU152675 | lncRNA | downstream | 165736 | 12375434 ~ 12375667 (+) | True | G134258 |
| CI01000026_12192269_12200366.mRNA | mRNA | upstream | 624 | 12191652 ~ 12200734 (+) | True | CI01000026_12192269_12200366 |
| CI01000026_12094316_12125431.mRNA | mRNA | upstream | 75094 | 12094316 ~ 12126264 (+) | True | CI01000026_12094316_12125431 |
| CI01000026_12074163_12076475.mRNA | mRNA | upstream | 123818 | 12073813 ~ 12077540 (+) | True | CI01000026_12074163_12076475 |
| CI01000026_11862091_11976290.mRNA | mRNA | upstream | 225068 | 11862091 ~ 11976290 (+) | True | CI01000026_11862091_11976290 |
| CI01000026_11809092_11810238.mRNA | mRNA | upstream | 390947 | 11808462 ~ 11810411 (+) | True | CI01000026_11809092_11810238 |
| CI01000026_12425699_12438163.mRNA | mRNA | downstream | 214381 | 12424079 ~ 12438621 (+) | True | CI01000026_12425699_12438163 |
| CI01000026_12486292_12534245.mRNA | mRNA | downstream | 276188 | 12485886 ~ 12534327 (+) | True | CI01000026_12486292_12534245 |
| CI01000026_12551009_12554565.mRNA | mRNA | downstream | 341311 | 12551009 ~ 12554565 (+) | False | CI01000026_12551009_12554565 |
| CI01000026_12558237_12560933.mRNA | mRNA | downstream | 348539 | 12558237 ~ 12561618 (+) | True | CI01000026_12558237_12560933 |
| CI01000026_12562467_12570436.mRNA | mRNA | downstream | 352769 | 12562467 ~ 12570774 (+) | True | CI01000026_12562467_12570436 |
| TU151829 | other | upstream | 724451 | 11476117 ~ 11476907 (+) | False | G133542 |
| TU151777 | other | upstream | 946285 | 11244933 ~ 11255073 (+) | True | G133497 |
| TU151694 | other | upstream | 1122278 | 11070768 ~ 11070876 (+) | True | G133429 |
| TU151441 | other | upstream | 2039397 | 10159819 ~ 10161961 (+) | True | G133192 |
| TU150881 | other | upstream | 2632198 | 9568739 ~ 9569160 (+) | False | G132667 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00066485 | True | 4551 | mRNA | 0.43 | 3 | NC_007118.7 | 40884012 ~ 40893295 (+) |
