RNA id: TU176764


Basic Information

Item Value
RNA id TU176764
length 240
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G155683
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7966287 ~ 7966526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCCCGATCAGGACTCGGATATGTATATATATTCTCATTATATTTAACACATCTATAGTTATGCGGTGGCACAGAGTTACGCCTGTTTCACGCTGCAAGCGTGAGCGTAACTACACCGTCACTGCAGCTGCAGAGACGCGCGAGTATTCACACTGGAAGCGTTTGTACAGCGTCACAGCAGCGGCTCGAAGCTACATATGTGAGCGTTTCTTTACAAAGACGGCTATACATTCGTTTTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176763 lncRNA upstream 2393 7963682 ~ 7963894 (+) True G155682
TU176712 lncRNA upstream 5127 7951604 ~ 7961160 (+) True G155632
TU176729 lncRNA upstream 22501 7942756 ~ 7943786 (+) True G155649
TU176728 lncRNA upstream 23806 7942267 ~ 7942481 (+) True G155648
TU176727 lncRNA upstream 24438 7941644 ~ 7941849 (+) True G155647
TU176743 lncRNA downstream 2978 7969504 ~ 8047016 (+) True G155662
TU176748 lncRNA downstream 93533 8060059 ~ 8063853 (+) True G155667
TU176755 lncRNA downstream 99174 8065700 ~ 8066608 (+) True G155674
TU176746 lncRNA downstream 117660 8084186 ~ 8092254 (+) True G155665
TU176770 lncRNA downstream 129297 8095823 ~ 8096101 (+) True G155689
CI01000029_07933165_07944093.mRNA mRNA upstream 22194 7933165 ~ 7944093 (+) False CI01000029_07933165_07944093
CI01000029_07922221_07926151.mRNA mRNA upstream 38751 7922221 ~ 7927536 (+) True CI01000029_07922221_07926151
CI01000029_07885342_07908699.mRNA mRNA upstream 56495 7884282 ~ 7909792 (+) True CI01000029_07885342_07908699
CI01000029_07672445_07687240.mRNA mRNA upstream 278414 7672445 ~ 7687873 (+) True CI01000029_07672445_07687240
CI01000029_07653640_07663101.mRNA mRNA upstream 303186 7653334 ~ 7663101 (+) True CI01000029_07653640_07663101
CI01000029_07997857_08002279.mRNA mRNA downstream 31170 7997696 ~ 8003097 (+) True CI01000029_07997857_08002279
CI01000029_08007965_08016092.mRNA mRNA downstream 40529 8007055 ~ 8016149 (+) True CI01000029_08007965_08016092
CI01000029_08019292_08036434.mRNA mRNA downstream 52766 8019292 ~ 8036758 (+) True CI01000029_08019292_08036434
CI01000029_08053844_08058278.mRNA mRNA downstream 87318 8053844 ~ 8058521 (+) True CI01000029_08053844_08058278
CI01000029_08072926_08079001.mRNA mRNA downstream 106400 8072926 ~ 8079112 (+) True CI01000029_08072926_08079001
TU176707 other upstream 34110 7931480 ~ 7932177 (+) True G155627
TU176602 other upstream 328453 7634833 ~ 7637834 (+) True G155522
TU176307 other upstream 1058855 6906188 ~ 6907432 (+) False CI01000029_06906861_06907157
TU176095 other upstream 1475993 6431535 ~ 6490294 (+) False G155083
TU177125 other downstream 998292 8964818 ~ 9064541 (+) False G156007

Expression Profile