RNA id: TU178146



Basic Information


Item Value
RNA id TU178146
length 226
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G156902
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8364127 ~ 8364352 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTGCATCGGTCTTTTCGCGTGATGGAAATGCCTGAGGCCTTGCATAAAATGTTATCATTTTATTAAAAAATAACCAGAATATAAATACATAGGATGTTAAAATATGTTCTCAGAACTGTACACTGATTATTTATGGACAGGTTATGGAGTCAGTCACAGCATTTTTCGGCTACGAGTGAAACGCAGGTGGTGGTCTGAAGTTATCAGTTCCCCCGCCGAACGCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU178144 lncRNA downstream 905 8363011 ~ 8363222 (-) True G156900
TU178143 lncRNA downstream 1185 8362642 ~ 8362942 (-) True G156899
TU178142 lncRNA downstream 2729 8361155 ~ 8361398 (-) True G156898
TU178141 lncRNA downstream 3021 8360804 ~ 8361106 (-) True G156897
TU178140 lncRNA downstream 3888 8359950 ~ 8360239 (-) True G156896
TU177966 lncRNA upstream 714 8365066 ~ 8369292 (-) True G156738
TU177955 lncRNA upstream 16374 8380726 ~ 8381457 (-) True G156727
TU177945 lncRNA upstream 18518 8382870 ~ 8384655 (-) True CI01000029_08384203_08407906
TU178158 lncRNA upstream 133906 8498258 ~ 8503179 (-) True G156913
TU178164 lncRNA upstream 152765 8517117 ~ 8517370 (-) True G156919
CI01000029_08250264_08262665.mRNA mRNA downstream 101462 8250249 ~ 8262665 (-) True CI01000029_08250264_08262665
CI01000029_08237701_08245368.mRNA mRNA downstream 118759 8236917 ~ 8245368 (-) False CI01000029_08237701_08245368
CI01000029_08229070_08234969.mRNA mRNA downstream 129158 8228965 ~ 8234969 (-) True CI01000029_08229070_08234969
CI01000029_08205518_08214627.mRNA mRNA downstream 149500 8205470 ~ 8214627 (-) True CI01000029_08205518_08214627
CI01000029_08185095_08190376.mRNA mRNA downstream 173751 8185029 ~ 8190376 (-) True CI01000029_08185095_08190376
CI01000029_08384203_08407906.mRNA mRNA upstream 19273 8383625 ~ 8407906 (-) False CI01000029_08384203_08407906
CI01000029_08463083_08479077.mRNA mRNA upstream 98640 8462992 ~ 8479190 (-) True CI01000029_08463083_08479077
CI01000029_08568672_08576837.mRNA mRNA upstream 202679 8567031 ~ 8577143 (-) False CI01000029_08568672_08576837
CI01000029_08606896_08609369.mRNA mRNA upstream 241154 8605506 ~ 8610176 (-) True CI01000029_08606896_08609369
CI01000029_08690880_08711534.mRNA mRNA upstream 325973 8690325 ~ 8711919 (-) True CI01000029_08690880_08711534
TU177684 other downstream 994580 7366327 ~ 7369547 (-) False G156495
TU177685 other downstream 994580 7366327 ~ 7369547 (-) False G156495
TU177741 other downstream 1193176 7170367 ~ 7170951 (-) False G156542
TU175317 other downstream 3376702 4986108 ~ 4987425 (-) False G154415

Expression Profile