Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00016643 |
| length | 1311 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | XLOC_008266 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 3808996 ~ 3816757 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018876 | lncRNA | upstream | 90613 | 3682401 ~ 3718383 (+) | True | XLOC_008264 |
| TCONS_00018875 | lncRNA | upstream | 113866 | 3682401 ~ 3695130 (+) | False | XLOC_008264 |
| TCONS_00018752 | lncRNA | upstream | 126090 | 3682312 ~ 3682906 (+) | False | XLOC_008264 |
| TCONS_00018874 | lncRNA | upstream | 213737 | 3593339 ~ 3595259 (+) | True | XLOC_008262 |
| TCONS_00018873 | lncRNA | upstream | 279215 | 3527405 ~ 3529781 (+) | True | XLOC_008260 |
| TCONS_00018753 | lncRNA | downstream | 133123 | 3949880 ~ 3954528 (+) | False | XLOC_008268 |
| TCONS_00018877 | lncRNA | downstream | 133123 | 3949880 ~ 3954691 (+) | True | XLOC_008268 |
| TCONS_00018878 | lncRNA | downstream | 496334 | 4313091 ~ 4320629 (+) | False | XLOC_008269 |
| TCONS_00018879 | lncRNA | downstream | 496334 | 4313091 ~ 4321015 (+) | False | XLOC_008269 |
| TCONS_00018880 | lncRNA | downstream | 496487 | 4313244 ~ 4319929 (+) | False | XLOC_008269 |
| TCONS_00016641 | mRNA | upstream | 4576 | 3766101 ~ 3804420 (+) | False | XLOC_008265 |
| TCONS_00016640 | mRNA | upstream | 12178 | 3766101 ~ 3796818 (+) | False | XLOC_008265 |
| TCONS_00016642 | mRNA | upstream | 12178 | 3790556 ~ 3796818 (+) | True | XLOC_008265 |
| TCONS_00016639 | mRNA | upstream | 25637 | 3766101 ~ 3783359 (+) | False | XLOC_008265 |
| TCONS_00016638 | mRNA | upstream | 25637 | 3766101 ~ 3783359 (+) | False | XLOC_008265 |
| TCONS_00016644 | mRNA | downstream | 8360 | 3825117 ~ 3925989 (+) | True | XLOC_008267 |
| TCONS_00016645 | mRNA | downstream | 816025 | 4632782 ~ 4635819 (+) | True | XLOC_008272 |
| TCONS_00016646 | mRNA | downstream | 1152371 | 4969128 ~ 4985077 (+) | True | XLOC_008273 |
| TCONS_00016647 | mRNA | downstream | 1171432 | 4988189 ~ 4999810 (+) | False | XLOC_008274 |
| TCONS_00016648 | mRNA | downstream | 1171445 | 4988202 ~ 4999804 (+) | True | XLOC_008274 |
| TCONS_00016634 | other | upstream | 302573 | 3506309 ~ 3506423 (+) | True | XLOC_008259 |
| TCONS_00016623 | other | upstream | 1123290 | 2685055 ~ 2685706 (+) | True | XLOC_008246 |
| TCONS_00016622 | other | upstream | 1134406 | 2673935 ~ 2674590 (+) | True | XLOC_008245 |
| TCONS_00016611 | other | upstream | 1450371 | 2358511 ~ 2358625 (+) | True | XLOC_008239 |
| TCONS_00016606 | other | upstream | 1935218 | 1873658 ~ 1873778 (+) | True | XLOC_008236 |
| TCONS_00016665 | other | downstream | 2038354 | 5855111 ~ 5855225 (+) | True | XLOC_008292 |
| TCONS_00016677 | other | downstream | 2742293 | 6559050 ~ 6559185 (+) | True | XLOC_008299 |
| TCONS_00016680 | other | downstream | 2861764 | 6678521 ~ 6727082 (+) | True | XLOC_008301 |
| TCONS_00016681 | other | downstream | 2953829 | 6770586 ~ 6772120 (+) | True | XLOC_008302 |
| TCONS_00016699 | other | downstream | 4866065 | 8682822 ~ 8682937 (+) | True | XLOC_008317 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000092_00015546_00042149.mRNA | True | 2714 | mRNA | 0.46 | 12 | CI01000092 | 15401 ~ 42149 (-) |
