Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00016650 |
| length | 2143 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 14 |
| gene id | XLOC_008276 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 5086338 ~ 5106171 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0003374 | dynamin family protein polymerization involved in mitochondrial fission | biological_process |
| GO:0098884 | postsynaptic neurotransmitter receptor internalization | biological_process |
| GO:0016185 | synaptic vesicle budding from presynaptic endocytic zone membrane | biological_process |
| GO:0048285 | organelle fission | biological_process |
| GO:0031623 | receptor internalization | biological_process |
| GO:0061025 | membrane fusion | biological_process |
| GO:0050803 | regulation of synapse structure or activity | biological_process |
| GO:0000266 | mitochondrial fission | biological_process |
| GO:0098844 | postsynaptic endocytic zone membrane | cellular_component |
| GO:0030424 | axon | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0015630 | microtubule cytoskeleton | cellular_component |
| GO:0045211 | postsynaptic membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0031966 | mitochondrial membrane | cellular_component |
| GO:0014069 | postsynaptic density | cellular_component |
| GO:0043197 | dendritic spine | cellular_component |
| GO:0044327 | dendritic spine head | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030721-9 | Predicted to enable GTPase activity and microtubule binding activity. Predicted to be involved in defense response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2). |
| ensembl_id | ENSDART00000155402 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018882 | lncRNA | upstream | 531910 | 4553896 ~ 4554428 (+) | True | XLOC_008271 |
| TCONS_00018754 | lncRNA | upstream | 554373 | 4528549 ~ 4531965 (+) | True | XLOC_008270 |
| TCONS_00018879 | lncRNA | upstream | 765323 | 4313091 ~ 4321015 (+) | False | XLOC_008269 |
| TCONS_00018755 | lncRNA | downstream | 150330 | 5256501 ~ 5256782 (+) | True | XLOC_008278 |
| TCONS_00018883 | lncRNA | downstream | 171732 | 5277903 ~ 5278903 (+) | True | XLOC_008279 |
| TCONS_00018884 | lncRNA | downstream | 361927 | 5468098 ~ 5470851 (+) | False | XLOC_008289 |
| TCONS_00018885 | lncRNA | downstream | 362189 | 5468360 ~ 5471508 (+) | True | XLOC_008289 |
| TCONS_00018886 | lncRNA | downstream | 735386 | 5841557 ~ 5853342 (+) | True | XLOC_008291 |
| TCONS_00016649 | mRNA | upstream | 11355 | 5028608 ~ 5074983 (+) | True | XLOC_008275 |
| TCONS_00016647 | mRNA | upstream | 86528 | 4988189 ~ 4999810 (+) | False | XLOC_008274 |
| TCONS_00016648 | mRNA | upstream | 86534 | 4988202 ~ 4999804 (+) | True | XLOC_008274 |
| TCONS_00016646 | mRNA | upstream | 101261 | 4969128 ~ 4985077 (+) | True | XLOC_008273 |
| TCONS_00016645 | mRNA | upstream | 450519 | 4632782 ~ 4635819 (+) | True | XLOC_008272 |
| TCONS_00016652 | mRNA | downstream | 10008 | 5116179 ~ 5148793 (+) | False | XLOC_008277 |
| TCONS_00016653 | mRNA | downstream | 26268 | 5132439 ~ 5148793 (+) | True | XLOC_008277 |
| TCONS_00016654 | mRNA | downstream | 171590 | 5277761 ~ 5280100 (+) | False | XLOC_008279 |
| TCONS_00016655 | mRNA | downstream | 174687 | 5280858 ~ 5284248 (+) | True | XLOC_008280 |
| TCONS_00016656 | mRNA | downstream | 181532 | 5287703 ~ 5289199 (+) | True | XLOC_008281 |
| TCONS_00016634 | other | upstream | 1579915 | 3506309 ~ 3506423 (+) | True | XLOC_008259 |
| TCONS_00016623 | other | upstream | 2400632 | 2685055 ~ 2685706 (+) | True | XLOC_008246 |
| TCONS_00016622 | other | upstream | 2411748 | 2673935 ~ 2674590 (+) | True | XLOC_008245 |
| TCONS_00016611 | other | upstream | 2727713 | 2358511 ~ 2358625 (+) | True | XLOC_008239 |
| TCONS_00016606 | other | upstream | 3212560 | 1873658 ~ 1873778 (+) | True | XLOC_008236 |
| TCONS_00016665 | other | downstream | 748940 | 5855111 ~ 5855225 (+) | True | XLOC_008292 |
| TCONS_00016677 | other | downstream | 1452879 | 6559050 ~ 6559185 (+) | True | XLOC_008299 |
| TCONS_00016680 | other | downstream | 1572350 | 6678521 ~ 6727082 (+) | True | XLOC_008301 |
| TCONS_00016681 | other | downstream | 1664415 | 6770586 ~ 6772120 (+) | True | XLOC_008302 |
| TCONS_00016699 | other | downstream | 3576651 | 8682822 ~ 8682937 (+) | True | XLOC_008317 |
