RNA id: CI01000058_00021632_00039608.mRNA


Basic Information

Item Value
RNA id CI01000058_00021632_00039608.mRNA
length 2338
RNA type mRNA
GC content 0.46
exon number 10
gene id CI01000058_00021632_00039608
representative False

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 21480 ~ 39970 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAATAAATAATAGACAAAATTGACTAACGATCTTGCTGCCCGATTAATTTGTCCTAGCCAATAGGAAGCTTTCATCACCAGCTGCATGCTGGTGTCATATCTAATTAATTTAGATCAAATAAGTCACTTAGCAAGTGTTGTGGTTGAATCATATGTGTGTTGAACTTACATTACGATTCCTGATAGAGAAATTCAAATTTGGGCTGTTTTATGTGACAGACAGAAGTGTGAACGTCTACAACATTTCTGTTATCAAAGAAAAGAAAATAGGACAGTTGGCCCAGGTAACCAGTCGGCCTGATCTTGACAATGTATACAAAGATATGGTGGAGGGGGAAAAAAAAGCTTTTCTGCAAGGAAAAGACATATGGAGCACTGCAAAAAGAGGGCAACAAATGAAGAGAAGTGCATCTCTAGATGCCAAAAACTTAACTATGGAGCTGTGCAGGCCATTACTTCAGTATGAGGGGGAGGGCAATAGCCACAGAATTTCCCTGGCTCAGAGTAAAGTTTTGGTCCCAAAAAAAGCCTACCATAGGCTCAACAGAGCAAGAATGAGCATCTTTGCTCAGGAGCTTGCCGTTTTAGTATTCTCAAAGGAAACTCTACAAGAATCCACTCTCACAGGAAAGTTTCGGCCAGGTGACCCACCAAAAAAGCAACTTGAAAAGGAAAAGGTGCATGCCTTAACAGCCACTGGATTGCTGCTGTGTGAAGGGCGCGGAGGAGGAGGTTGTTGCTGCCTGCTGTTGGAGATCCTGCGGTGTCTGCAGGATGAGGATGCTCCCATCCATGGCTTCTTCCCGTGGTCTCCAGATGGCGCTGGTGGAGGGCAGGGTTGGATGTCTGAGGCATACTGGCACACTTGTGGGAACACGGGAGAGACATGGCAAGGCAAATGCAAGTTCGTAAAGCTATCTGTGTGGTGGGGGAATGGCTATGTGGGTCATGTAAGGTTTGGTCACTATGAGGGTAACAAACAAAACAAAACTGGAAAAAGGAAGAAGAAAAGAGAAAATAAGATGGAATCAGAAAGATCCCGAGAACTGCAACCTGGACAAGAGGTTTTGTTACTGCTTCCAACATCGACGAACAAACTACTGATGAATTGGCAAGGCCCGTACAGTGTAGTTCGTAAGATGGGACCAGTGACATATGAAATTCATCACCCTGACAAGGGCAAGACTGTACAAACCTATCACATCAACCTCCTGAAGGAGTGGAAAGAACCACCAAGCACCCCAGAAACATCGCTGCTGATTCGTGAGGTGGAGGATGATCAGGAGGATGAACAGCCAGAGCCGAAGGCCTGGGCGGACCAGCTTGGTACAACACCAGACAAGGACAAGGTAGAAGCAGTTCGACGTAGCCCAAGACCAAGGACAAAGAAGGAGGTCAGATCCTTCTTAGGACTGGTGAGGTGGTATCGACGGTTCATCCCCAACTTCTCTACCACCGCCGTCCCATTGACCAACCTGCTCTGTAAGAACGTGAAGAACCCGATTGTCTGGACTGAGGAATGTGAAATGGCCTTCAACACCCTAAATAGGCAGATGTGTTCTGGCCCGATCCTCATAAGTCCTGACTTCACAAAGGCATTCATTGTTCAGGTAGATGCTTCGGCTGTGGGGATTGGAGCAGTCCTGGCCCAAGGAGATATGGGCGAAGAGAGGCCCATAGCATTCCTGAGCAGGAAACTGCTACCCAGAGAAAGCCGATACTCTACAGTGGAGAAGGAAGGTTTGGTGATCAAGTGGGCCTTGGAGAGCCTCGGGTACTACTTGCTAGGAAGGGAGTTTACCCTAGAAACAGATCACCGAGCCCTGACGTGGATCCACACCATGAAGGACCACAACTCTCAGGTGACTAGGTGGTACCTCTCCCTGCAACCCTACCAGTTTAAGCATTGCTTTCGCGTTGCTTCTCCACCATCAGTCGGCCGAACCCGAGCATCACCCAGCGGCCTGGATAAATAGTGCCGGGACCGTTGTGTGTGGGCACACCGGTGCGAAGCAACCGGAAGTCGGCTCGTCCATTGCCTCGATAATAAGGGGGGATAATGGAAATGTGGCATTATTATTATGTTTATTATTATTATTTATGTCTACATTTGTATTTGTTATTTTGTATTTTATTTCTATAAATATTTCATTATTTTATGTGTGTATATATTTATGTGATGTTGTGAAAATGTATATTGTGATGTCCTTACATTAATGCACCACTAGATGGCACTTGAGTTTCCTGAGTTATATATACACATAGGAAGTAAGTGAGAAGAGTGAGAAAGAATGCTGAGCATGTGCATGCATGTTATCCTGCTTGTTCAAATTAGTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU280505 lncRNA downstream 5678 45648 ~ 45947 (+) True G247150
TU280510 lncRNA downstream 10048 50018 ~ 50321 (+) True G247155
TU280515 lncRNA downstream 11577 51547 ~ 51928 (+) True G247160
TU280517 lncRNA downstream 12413 52383 ~ 52678 (+) True G247162
TU280518 lncRNA downstream 12914 52884 ~ 53102 (+) True G247163
CI01000058_00043409_00059894.mRNA mRNA downstream 3439 43409 ~ 60422 (+) True CI01000058_00043409_00059894
CI01000058_00104333_00105839.mRNA mRNA downstream 64363 104333 ~ 106724 (+) True CI01000058_00104333_00105839
CI01000058_00241253_00245763.mRNA mRNA downstream 201283 241253 ~ 246107 (+) True CI01000058_00241253_00245763
CI01000058_00313907_00314170.mRNA mRNA downstream 273787 313757 ~ 314670 (+) True CI01000058_00313907_00314170
CI01000058_00333202_00355871.mRNA mRNA downstream 293070 333040 ~ 355875 (+) True CI01000058_00333202_00355871
TU280659 other downstream 395072 435042 ~ 455744 (+) True CI01000058_00435196_00437830
TU280966 other downstream 552361 592331 ~ 597171 (+) True CI01000058_00592498_00596709
TU281473 other downstream 1188639 1228609 ~ 1228623 (+) True G247990
TU281423 other downstream 1413027 1452997 ~ 1456447 (+) True G247940
TU281441 other downstream 1755743 1795713 ~ 1795757 (+) True G247958

Expression Profile