Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000058_04782847_04791049.mRNA |
| length | 1601 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 13 |
| gene id | CI01000058_04782847_04791049 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 4782847 ~ 4791555 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008766 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity | molecular_function |
| id | description |
|---|---|
| K10686 | UBA3, UBE1C; NEDD8-activating enzyme E1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU283812 | lncRNA | upstream | 44402 | 4727809 ~ 4738445 (+) | True | G250075 |
| TU283776 | lncRNA | upstream | 93327 | 4686635 ~ 4689520 (+) | True | CI01000058_04678629_04687645 |
| TU283786 | lncRNA | upstream | 105696 | 4676913 ~ 4677151 (+) | True | G250049 |
| TU283764 | lncRNA | upstream | 240604 | 4541999 ~ 4542243 (+) | True | G250035 |
| TU283723 | lncRNA | upstream | 330276 | 4451527 ~ 4452571 (+) | True | G250013 |
| TU283841 | lncRNA | downstream | 92450 | 4884005 ~ 4884279 (+) | True | G250098 |
| TU283838 | lncRNA | downstream | 92907 | 4884462 ~ 4885100 (+) | True | G250095 |
| TU283863 | lncRNA | downstream | 113385 | 4904940 ~ 4905140 (+) | True | G250120 |
| TU283867 | lncRNA | downstream | 126817 | 4918372 ~ 4918573 (+) | True | G250124 |
| TU283931 | lncRNA | downstream | 293085 | 5084640 ~ 5137852 (+) | True | G250187 |
| CI01000058_04777182_04780095.mRNA | mRNA | upstream | 2471 | 4776542 ~ 4780376 (+) | True | CI01000058_04777182_04780095 |
| CI01000058_04769469_04774262.mRNA | mRNA | upstream | 8362 | 4769469 ~ 4774485 (+) | True | CI01000058_04769469_04774262 |
| CI01000058_04748480_04757498.mRNA | mRNA | upstream | 25209 | 4748424 ~ 4757638 (+) | True | CI01000058_04748480_04757498 |
| CI01000058_04678629_04687645.mRNA | mRNA | upstream | 94352 | 4678102 ~ 4688495 (+) | False | CI01000058_04678629_04687645 |
| CI01000058_04656762_04675421.mRNA | mRNA | upstream | 106750 | 4656316 ~ 4676097 (+) | True | CI01000058_04656762_04675421 |
| CI01000058_04792565_04803181.mRNA | mRNA | downstream | 1010 | 4792565 ~ 4803404 (+) | True | CI01000058_04792565_04803181 |
| CI01000058_04806751_04821030.mRNA | mRNA | downstream | 15196 | 4806751 ~ 4821695 (+) | True | CI01000058_04806751_04821030 |
| CI01000058_04864571_04888198.mRNA | mRNA | downstream | 73016 | 4864571 ~ 4888216 (+) | False | CI01000058_04864571_04888198 |
| CI01000058_04923557_04926609.mRNA | mRNA | downstream | 131735 | 4923290 ~ 4927654 (+) | True | CI01000058_04923557_04926609 |
| CI01000058_05091135_05091372.mRNA | mRNA | downstream | 299580 | 5091135 ~ 5092015 (+) | True | CI01000058_05091135_05091372 |
| TU283770 | other | upstream | 85686 | 4694462 ~ 4697161 (+) | False | G250039 |
| TU283771 | other | upstream | 85815 | 4694462 ~ 4697032 (+) | True | G250039 |
| TU283772 | other | upstream | 85937 | 4694408 ~ 4696910 (+) | False | G250039 |
| TU283769 | other | upstream | 85937 | 4694462 ~ 4696910 (+) | False | G250039 |
| TU281441 | other | upstream | 2985115 | 1795713 ~ 1795757 (+) | True | G247958 |
| TU283837 | other | downstream | 34821 | 4826376 ~ 4849531 (+) | True | G250094 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00007774 | False | 1805 | mRNA | 0.45 | 18 | NC_007122.7 | 17785182 ~ 17803071 (-) |
