Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU312851 |
| length | 226 |
| RNA type | TUCP |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G275755 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 3426149 ~ 3426374 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312974 | lncRNA | downstream | 52272 | 3360488 ~ 3360701 (-) | True | G275878 |
| TU312972 | lncRNA | downstream | 55552 | 3357221 ~ 3357421 (-) | True | G275876 |
| TU312868 | lncRNA | downstream | 100077 | 3306489 ~ 3312896 (-) | True | G275772 |
| TU312910 | lncRNA | downstream | 128782 | 3280912 ~ 3284191 (-) | True | G275814 |
| TU312952 | lncRNA | downstream | 151469 | 3261296 ~ 3261504 (-) | True | G275856 |
| TU312846 | lncRNA | upstream | 169347 | 3595721 ~ 3627754 (-) | True | G275750 |
| TU312922 | lncRNA | upstream | 181078 | 3607452 ~ 3614839 (-) | True | G275826 |
| TU312850 | lncRNA | upstream | 186379 | 3612753 ~ 3636263 (-) | True | G275754 |
| TU312924 | lncRNA | upstream | 187944 | 3614318 ~ 3633114 (-) | True | G275828 |
| TU313017 | lncRNA | upstream | 310280 | 3736654 ~ 3736958 (-) | True | G275920 |
| CI01000069_03382399_03395900.mRNA | mRNA | downstream | 17073 | 3382132 ~ 3395900 (-) | True | CI01000069_03382399_03395900 |
| CI01000069_03365921_03371931.mRNA | mRNA | downstream | 41029 | 3365463 ~ 3371944 (-) | True | CI01000069_03365921_03371931 |
| CI01000069_03315611_03353645.mRNA | mRNA | downstream | 59240 | 3315512 ~ 3353733 (-) | True | CI01000069_03315611_03353645 |
| CI01000069_03298533_03302831.mRNA | mRNA | downstream | 110142 | 3298197 ~ 3302831 (-) | True | CI01000069_03298533_03302831 |
| CI01000069_03242808_03248880.mRNA | mRNA | downstream | 164093 | 3241819 ~ 3248880 (-) | True | CI01000069_03242808_03248880 |
| CI01000069_03430311_03432182.mRNA | mRNA | upstream | 3909 | 3430283 ~ 3432207 (-) | True | CI01000069_03430311_03432182 |
| CI01000069_03433325_03435163.mRNA | mRNA | upstream | 6913 | 3433287 ~ 3435275 (-) | True | CI01000069_03433325_03435163 |
| CI01000069_03441535_03443377.mRNA | mRNA | upstream | 14896 | 3441270 ~ 3443400 (-) | True | CI01000069_03441535_03443377 |
| CI01000069_03444473_03455791.mRNA | mRNA | upstream | 18018 | 3444392 ~ 3457756 (-) | True | CI01000069_03444473_03455791 |
| CI01000069_03474790_03478425.mRNA | mRNA | upstream | 48416 | 3474790 ~ 3478425 (-) | True | CI01000069_03474790_03478425 |
| TU312791 | other | downstream | 334805 | 2992504 ~ 3078168 (-) | True | G275699 |
| TU312760 | other | downstream | 412540 | 2989026 ~ 2991817 (-) | True | G275668 |
| TU312711 | other | downstream | 782657 | 2621752 ~ 2630316 (-) | True | G275624 |
| TU312710 | other | downstream | 782726 | 2621752 ~ 2630247 (-) | False | G275624 |
| TU312389 | other | downstream | 1765647 | 1645768 ~ 1647326 (-) | True | CI01000069_01645966_01647142 |
| TU312899 | other | upstream | 136919 | 3563293 ~ 3576335 (-) | True | CI01000069_03571631_03573352 |
| TU312875 | other | upstream | 339299 | 3765673 ~ 3769220 (-) | True | CI01000069_03768812_03787588 |
| TU312842 | other | upstream | 378242 | 3805663 ~ 3805758 (-) | True | G275746 |
| TU313201 | other | upstream | 1513147 | 4942073 ~ 4942199 (-) | True | G276079 |
| TU313215 | other | upstream | 1542921 | 4985966 ~ 4986424 (-) | True | CI01000069_04985959_04986408 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00051570 | True | 866 | mRNA | 0.49 | 4 | NC_007114.7 | 31850851 ~ 31875138 (-) |
| striped catfish (Pangasianodon hypophthalmus) | TU242673 | False | 4305 | TUCP | 0.41 | 5 | NC_047607.1 | 3966758 ~ 3986284 (+) |
