RNA id: TU324361


Basic Information

Item Value
RNA id TU324361
length 897
RNA type TUCP
GC content 0.41
exon number 2
gene id G286205
representative False

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 3970128 ~ 3976067 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCTGAATTATAAGGATAGTTGGAGGAGAGGCGTATTCGTCCAAGGTATTTTGCCCTGTGAGGAGGTTTACGCTGTGTTGCACTTGCACGAGACGAGAACACGTTTATCAGCGTCTGTAATTGCGCGTCATGGATTGTCATATCGAGGAATGCAACCAACCACAAGAGGAAGAGGACATCATGGACATCCCATTGGATGACCCAGAGGCCAATAAGGCAGCCGCCAAAATCCAGGCCGGCTTCCGTGGTCATATGACCCGGAAGAAGATGAAACCCGGTGAAAAGCCTAATGAGGAGGTGAGCAGCAGTGGTGAGGCCCTCAACGGCAGCCAAGGGGACTCAGGGGGAACAGACGGAGTAGAGACAGATGCCACATCTGGTCCAGAGCAATGAAGACCTTTCTCAAGGTGGATGGCTTATAAGACGCTTTCTCCAGGGATTTTTTGTGTCGAAAAAGTAGTAAAACTAGGCTGGATATGTCATCTGATATGTGAACTCTTTCTCTATTTTCTGCTTCTTATCCAGTCCGGGTGAATTTCTGCTCCAGCATGCTTTTGCATCCCACAGAAGGCATCTGTATACTGTATATCTGATATTTGTACGAGAATTTAACACAGGCTTCTTCAGTCAGACAGTCAAGTAGACTTAAAATAATGCATCATGATTGAGTTTTGTCATTTTTGTTATTTGATATTCCTTTTCTGTGGTAGTATGTTTATGATTGCCTCAATTTGACCATGTAGCTACTATCACAATAAGATGTGAATTTTGTTTAATGTCATGAAACAGAATGTTATCGGTTGTTTATAATTGTGTTGACTGATTTGTTTGGTTTGCACTTTGCACCCTGTAATATGTTAAAAATGAAATCAGAGCTTCCAAAGCAGCATATGGCATGGCAAGATCAACTTATTTATTATCGACTCATTTATTTCCATTTATTTTAATTTGTAAAATGATTTCTTCTGAGTTCCTTAAGGTAGTGCATATCATTAGAAGTATAGAAATTGAGTTGTGACAGCTTAATGAGTGATAGCTAAGATCACCTTGCATGTTGACATCAGCATCAAGCTCTGTATCAGTTGAAAAGCTAATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU324445 lncRNA downstream 128208 3841670 ~ 3842062 (-) True G286256
TU324425 lncRNA downstream 468055 3501101 ~ 3502215 (-) True G286236
TU324438 lncRNA downstream 497219 3393763 ~ 3473051 (-) True G286249
TU324406 lncRNA downstream 534071 3410662 ~ 3436199 (-) True G286219
TU324482 lncRNA downstream 578892 3391163 ~ 3391378 (-) True G286290
TU325197 lncRNA upstream 77049 4053051 ~ 4065995 (-) False G286867
TU325196 lncRNA upstream 84757 4060759 ~ 4064416 (-) True G286867
TU325206 lncRNA upstream 90934 4066936 ~ 4067174 (-) True G286873
TU325207 lncRNA upstream 91591 4067593 ~ 4067795 (-) True G286874
TU325210 lncRNA upstream 104980 4080982 ~ 4081213 (-) True G286877
CI01000072_03959944_03964339.mRNA mRNA downstream 5654 3959919 ~ 3964616 (-) True CI01000072_03959944_03964339
CI01000072_03941680_03952617.mRNA mRNA downstream 17653 3941331 ~ 3952617 (-) True CI01000072_03941680_03952617
CI01000072_03908090_03922942.mRNA mRNA downstream 47328 3907387 ~ 3922942 (-) True CI01000072_03908090_03922942
CI01000072_03898250_03900844.mRNA mRNA downstream 69426 3898165 ~ 3900844 (-) True CI01000072_03898250_03900844
CI01000072_03844170_03870555.mRNA mRNA downstream 99715 3843492 ~ 3870555 (-) True CI01000072_03844170_03870555
CI01000072_04125176_04131163.mRNA mRNA upstream 147556 4123558 ~ 4131448 (-) True CI01000072_04125176_04131163
CI01000072_04150260_04155131.mRNA mRNA upstream 174228 4150230 ~ 4157566 (-) True CI01000072_04150260_04155131
CI01000072_04156907_04167270.mRNA mRNA upstream 180905 4156907 ~ 4167270 (-) True CI01000072_04156907_04167270
CI01000072_04191370_04195085.mRNA mRNA upstream 215368 4191370 ~ 4195085 (-) True CI01000072_04191370_04195085
CI01000072_04197826_04201434.mRNA mRNA upstream 221824 4197826 ~ 4201434 (-) True CI01000072_04197826_04201434
TU324139 other downstream 970775 2993769 ~ 2999495 (-) True G286005
TU323875 other downstream 1799612 2168048 ~ 2170658 (-) True G285752
TU323892 other downstream 1961961 2005551 ~ 2008309 (-) True G285766
TU323812 other downstream 2342375 1602289 ~ 1602443 (-) True G285697
TU323815 other downstream 2342375 1594111 ~ 1627895 (-) True CI01000072_01596829_01610605
TU325381 other upstream 410143 4386145 ~ 4394223 (-) True G287021
TU325650 other upstream 1404718 5380720 ~ 5382001 (-) True G287264

Expression Profile