RNA id: TU325432


Basic Information

Item Value
RNA id TU325432
length 395
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G287072
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4430911 ~ 4431305 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACGTCATTAACAACTAGTTGTTCAGTTCGGTTACATACACACTGCATATAATTTCTGTAAATGCGGTTGTCACTACCTGTATTTTTTGGGTGTTAATACGGTTGTAGAATGCGGTTGTCACTCCCGTATTTTACTGAACTGTGTGTGTACAGAACGCGATTAAGCACTAAAAGGTGAACTGACAACCGAATTTAGCTGCAGTGTGTACGTGGCCTTAGTGTTGCACAATCCTGTCACGTCCTTTGCTACGTCTCGCGTATGACACGGCATTTGAATTTGGAAAAGAAACACAAAACTGACGGGAGCCGCTCCGGTGGAGAACAGTGACTGGATCTAACACCTTAAGATGACGCACAGCTCATATCTCTGTCACAGTAAGTTACCGAAAGCGAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325431 lncRNA downstream 53 4430643 ~ 4430858 (-) True G287071
TU325384 lncRNA downstream 8242 4422374 ~ 4422669 (-) True G287024
TU325420 lncRNA downstream 9062 4421336 ~ 4421849 (-) True G287060
TU325419 lncRNA downstream 10496 4420197 ~ 4420415 (-) True G287059
TU325383 lncRNA downstream 16560 4413537 ~ 4414351 (-) True G287023
TU325354 lncRNA upstream 72128 4503433 ~ 4510633 (-) True G286994
TU325366 lncRNA upstream 81553 4541836 ~ 4542104 (-) True G287006
TU325387 lncRNA upstream 190602 4621907 ~ 4685983 (-) True G287027
TU325303 lncRNA upstream 192306 4623611 ~ 4626334 (-) True G286959
TU325315 lncRNA upstream 212655 4643960 ~ 4677446 (-) False G286964
CI01000072_04315603_04316880.mRNA mRNA downstream 114031 4314911 ~ 4316880 (-) True CI01000072_04315603_04316880
CI01000072_04284927_04303593.mRNA mRNA downstream 127318 4284426 ~ 4303593 (-) True CI01000072_04284927_04303593
CI01000072_04207000_04210775.mRNA mRNA downstream 219833 4206961 ~ 4211078 (-) True CI01000072_04207000_04210775
CI01000072_04197826_04201434.mRNA mRNA downstream 229477 4197826 ~ 4201434 (-) True CI01000072_04197826_04201434
CI01000072_04191370_04195085.mRNA mRNA downstream 235826 4191370 ~ 4195085 (-) True CI01000072_04191370_04195085
CI01000072_04514012_04539785.mRNA mRNA upstream 81473 4512778 ~ 4539876 (-) False CI01000072_04514012_04539785
CI01000072_04577347_04600719.mRNA mRNA upstream 145744 4577049 ~ 4600719 (-) True CI01000072_04577347_04600719
CI01000072_04602970_04610481.mRNA mRNA upstream 171544 4602849 ~ 4610481 (-) True CI01000072_04602970_04610481
CI01000072_04613981_04618187.mRNA mRNA upstream 182135 4613440 ~ 4618187 (-) True CI01000072_04613981_04618187
CI01000072_04796909_04805902.mRNA mRNA upstream 365475 4796780 ~ 4805902 (-) True CI01000072_04796909_04805902
TU325381 other downstream 36688 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 454844 3970270 ~ 3976067 (-) False G286205
TU324361 other downstream 454909 3970270 ~ 3976002 (-) False G286205
TU325650 other upstream 949415 5380720 ~ 5382001 (-) True G287264

Expression Profile