RNA id: TU325494


Basic Information

Item Value
RNA id TU325494
length 266
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G287129
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4840887 ~ 4841553 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGCAATAAAAGTCAGACATTTTTGAATAATGTTTAAAGGTTCTGGGTCTTTTAATGTTTTCGGGAAAAAAGTGTATTAGAAGTCTAATTCATGCTGATTAAGTGTTCAAGAAACATTTCTTATTATCAATATTAAAGCTGCAGTCCGTAATAGTGTTACCCATAGATTTCAATTTCTGTAGCCACTCCGCATTCCGAAGTCTTTTGCTTTTGACTACGGGTTAATCTCCAGTTGTCACTGATTATTGTCATTTGGACCTTTCTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325357 lncRNA downstream 44442 4796091 ~ 4796445 (-) True G286997
TU325474 lncRNA downstream 69451 4771077 ~ 4771436 (-) True G287111
TU325472 lncRNA downstream 72049 4768631 ~ 4768838 (-) True G287109
TU325471 lncRNA downstream 73037 4767182 ~ 4767850 (-) True G287108
TU325333 lncRNA downstream 79540 4760801 ~ 4761347 (-) True G286974
TU325309 lncRNA upstream 36587 4878140 ~ 4881638 (-) True G286962
TU325521 lncRNA upstream 181792 5023345 ~ 5023593 (-) True G287154
TU325371 lncRNA upstream 184568 5026121 ~ 5027092 (-) True G287011
TU325529 lncRNA upstream 289589 5131142 ~ 5140674 (-) True G287161
TU325576 lncRNA upstream 309171 5150724 ~ 5151489 (-) True G287206
CI01000072_04818513_04830986.mRNA mRNA downstream 9090 4818145 ~ 4831797 (-) True CI01000072_04818513_04830986
CI01000072_04810045_04816219.mRNA mRNA downstream 24395 4809896 ~ 4816492 (-) True CI01000072_04810045_04816219
CI01000072_04796909_04805902.mRNA mRNA downstream 34985 4796780 ~ 4805902 (-) True CI01000072_04796909_04805902
CI01000072_04613981_04618187.mRNA mRNA downstream 222700 4613440 ~ 4618187 (-) True CI01000072_04613981_04618187
CI01000072_04602970_04610481.mRNA mRNA downstream 230406 4602849 ~ 4610481 (-) True CI01000072_04602970_04610481
CI01000072_04932845_04949502.mRNA mRNA upstream 91147 4932700 ~ 4949502 (-) True CI01000072_04932845_04949502
CI01000072_04992647_05006768.mRNA mRNA upstream 150665 4992218 ~ 5006768 (-) True CI01000072_04992647_05006768
CI01000072_05039232_05046122.mRNA mRNA upstream 197533 5039086 ~ 5046474 (-) True CI01000072_05039232_05046122
CI01000072_05053749_05071797.mRNA mRNA upstream 212091 5053644 ~ 5071797 (-) True CI01000072_05053749_05071797
CI01000072_05099789_05108316.mRNA mRNA upstream 257868 5099421 ~ 5109781 (-) True CI01000072_05099789_05108316
TU325381 other downstream 446664 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 864820 3970270 ~ 3976067 (-) False G286205
TU324361 other downstream 864885 3970270 ~ 3976002 (-) False G286205
TU325650 other upstream 539167 5380720 ~ 5382001 (-) True G287264

Expression Profile