RNA id: CI01000092_02026073_02027161.mRNA



Basic Information


Item Value
RNA id CI01000092_02026073_02027161.mRNA
length 1341
RNA type mRNA
GC content 0.48
exon number 2
gene id CI01000092_02026073_02027161
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2026062 ~ 2027525 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AATCCGACTGGAGTTTCCCACCTTTGGTGATGCATGTGAGACGGCGGATGTACTCACCTTCGTCGAACAGTGCGAGAATTACCTGTAAATCAGGCTACTGTCCAGTGCAGAGCTCGTCGGAACCCTGAGTATGGTGTTGCGTGGGCTGGCTTTGAGCTGGTGGAAGGCGGAAAAGAGGAAGATAACCAACTGGCTGTCTTTCAAGAAGGCATTCATGGCTGCTTTTTTACCTGAAGATTACCTCACGGAGGTTGAGGACAAGCTGAGGTTGATGGTTCAACAGCCGAAATAGCACCTGAGAGACTTCGCCTACAACTATCGGGCCCTCTGCCTGAAGCGGAAACCTGATATTTCAGAGGACGAGATGGTGAGTTGCATCCTTAATAACATCAACCCTAGAGTTGCTGGCTTCCTGCGAGGGACGGTGAAAACGGTAGAACAGTTGGTAAAATTGGGTTCAGTGGTGGAGAAGGATTGTTTAGGGGTGAAGGACTACTGGCAGAAGGGCAAAGAATTTAAGGCGGTGGTCGACACAGGAAGCACCTTTACACTAATGCAGGAAACCCTGTGGAGACAGCTAGGAGGTGACGCAGCGACAAGAACATCAGACTCTCCTCAAAAGTTCGTCATGGCAGATGGCAAGGTTCACCAAGTTATAGACCAGAGAAACATCACCTACAAGTGGCACAATAAGGTATGCAAATTAAATACCTTTATAATGAAAGATGCTAACTTAGCATTTCCTCTTTTGGCTGGACTGGACCTTCTGAGGGCTTCTGGTGCCATTTTGGAGCTTGCTCAGAATAAATATGGCCTGGAGACAGAAGGAGGTTATATGTATTACCCTTTCTACAACACTCAGATGACTCCGGGGGTAACTACCATGTCTGCTGGTGAAACTAGGCACCACCCTGCCTCTGTAAGTCTATACTATGCCTTACCTCCGACCTGGGAAATACCACTCACTTCCCCTCAACCTCTAGATGCTCCAGTCTGGGACTCAAACAATCAAGAGGAGCTGCTGAAGCTGATGGCTGCCTGGCCACGTGCTGCCTCCGACATCCTGGGGAAGACAGATGTAGAAAAACACAAAATCATTTTGTCAGATGAAGTGCCCATTAAATCTCGAGCTTACCGTGTTTCCCCTTTCAAGATGAAGATCATTGAGGAACACGTGGACCAGATGCTCAAAGACCACATCATCGAGCCCTCTTTTTTTTCCCATGGGCATCACCGGTCGTCTTGGTCCCTAAACCAGACGGAACATACAGATCGACTACAGAAAAATGTTGACTACAGAAAACTTAACAGCAAGACAATACCAGGTTGACGCTGAAAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346294 lncRNA downstream 20865 2004746 ~ 2005197 (-) True G304777
TU346284 lncRNA downstream 48843 1972782 ~ 1977219 (-) True G304769
TU346281 lncRNA downstream 60579 1965231 ~ 1965483 (-) True G304768
TU346279 lncRNA downstream 61418 1964055 ~ 1964644 (-) False CI01000092_01964262_01964863
TU346280 lncRNA downstream 61575 1964432 ~ 1964487 (-) True G304767
TU346315 lncRNA upstream 21600 2049125 ~ 2049332 (-) True G304795
TU346379 lncRNA upstream 97865 2125390 ~ 2161014 (-) True G304853
TU346428 lncRNA upstream 204994 2232519 ~ 2232949 (-) True G304895
TU346431 lncRNA upstream 211212 2238737 ~ 2239195 (-) True G304898
TU346433 lncRNA upstream 212880 2240405 ~ 2241173 (-) True G304900
CI01000092_01981235_01981861.mRNA mRNA downstream 44201 1980463 ~ 1981861 (-) True CI01000092_01981235_01981861
CI01000092_01964262_01964863.mRNA mRNA downstream 61199 1964079 ~ 1964863 (-) False CI01000092_01964262_01964863
CI01000092_01908289_01908682.mRNA mRNA downstream 117371 1907311 ~ 1908691 (-) True CI01000092_01908289_01908682
CI01000092_01866991_01869504.mRNA mRNA downstream 156558 1866901 ~ 1869504 (-) False CI01000092_01866991_01869504
CI01000092_01802304_01802591.mRNA mRNA downstream 221823 1800795 ~ 1804239 (-) True CI01000092_01802304_01802591
CI01000092_02039063_02039980.mRNA mRNA upstream 11315 2038840 ~ 2040333 (-) True CI01000092_02039063_02039980
CI01000092_02043716_02044633.mRNA mRNA upstream 15866 2043391 ~ 2044672 (-) True CI01000092_02043716_02044633
CI01000092_02055330_02056247.mRNA mRNA upstream 27492 2055017 ~ 2056286 (-) True CI01000092_02055330_02056247
CI01000092_02072036_02082309.mRNA mRNA upstream 44203 2071728 ~ 2083780 (-) True CI01000092_02072036_02082309
CI01000092_02134927_02166170.mRNA mRNA upstream 106293 2133818 ~ 2166547 (-) True CI01000092_02134927_02166170
TU345950 other downstream 793770 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 929144 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 967142 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 967198 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 697069 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 1650349 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2468889 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2776870 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 3126143 5153668 ~ 5154133 (-) True G306902

Expression Profile