RNA id: TU347697


Basic Information

Item Value
RNA id TU347697
length 353
lncRNA type sense_over
GC content 0.47
exon number 1
gene id CI01000092_03682820_03688497
representative True

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3682263 ~ 3688531 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCTTCAGCAAGCGCTCTGTGTTATCGTGTGTCTTATTTGGTGTTGTTTGTCTTATTACATAAACAAGTCACAATCTCTTCGTCTGAGGACAAGAGTATCTCACACCAATCCATATATTTATATATAAAAAAACAGCAGTTGAATGGGAGTTGAGCATGCCCAGGCAGCTCTTGAGGGAGCGGTCTGTGCACACTGTAAAAAAAAAAAAACTCACTCTCAGAACACTGTGTTCCTGTGTTCCCCGCGGATCGGGTCCCGCTTCTGCTGAGGCAGAGCGGAGGCTCCATTCGTGGGGTTCACAATTGGATCTGACAGAGGGATTAGAGACGGGCGCCGCCCTTTCTCTGCCCTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU347687 lncRNA downstream 4495 3676767 ~ 3677768 (-) True G306010
TU347694 lncRNA downstream 7829 3671445 ~ 3674434 (-) True G306017
TU347485 lncRNA downstream 83534 3597328 ~ 3598729 (-) True G305810
TU347742 lncRNA downstream 91284 3590733 ~ 3590979 (-) True G306053
TU347737 lncRNA downstream 95154 3586867 ~ 3587109 (-) True G306051
TU347777 lncRNA upstream 42412 3725027 ~ 3725677 (-) True G306083
TU347795 lncRNA upstream 59865 3742480 ~ 3743248 (-) True G306089
TU347829 lncRNA upstream 332170 4014785 ~ 4015061 (-) True G306120
TU347830 lncRNA upstream 343149 4025764 ~ 4026076 (-) True G306121
TU347832 lncRNA upstream 344759 4027374 ~ 4027599 (-) True G306123
CI01000092_03652598_03660979.mRNA mRNA downstream 21159 3652598 ~ 3661104 (-) True CI01000092_03652598_03660979
CI01000092_03630767_03645397.mRNA mRNA downstream 36107 3630626 ~ 3646156 (-) True CI01000092_03630767_03645397
CI01000092_03614992_03615400.mRNA mRNA downstream 65280 3614437 ~ 3616983 (-) True CI01000092_03614992_03615400
CI01000092_03600064_03611514.mRNA mRNA downstream 70115 3599914 ~ 3612148 (-) True CI01000092_03600064_03611514
CI01000092_03418301_03428309.mRNA mRNA downstream 253954 3418301 ~ 3428309 (-) True CI01000092_03418301_03428309
CI01000092_03702024_03712418.mRNA mRNA upstream 18331 3700946 ~ 3712418 (-) True CI01000092_03702024_03712418
CI01000092_03733899_03743505.mRNA mRNA upstream 50342 3732957 ~ 3743557 (-) True CI01000092_03733899_03743505
CI01000092_03750015_03753913.mRNA mRNA upstream 66625 3749240 ~ 3753976 (-) True CI01000092_03750015_03753913
CI01000092_03762168_03785262.mRNA mRNA upstream 78205 3760820 ~ 3785407 (-) True CI01000092_03762168_03785262
CI01000092_03841542_03853786.mRNA mRNA upstream 157722 3840337 ~ 3853992 (-) True CI01000092_03841542_03853786
TU347691 other downstream 2775 3677874 ~ 3679488 (-) True G306014
TU347441 other downstream 957319 2724594 ~ 2724944 (-) True G305772
TU345950 other downstream 2449971 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 2585345 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 2623343 1058367 ~ 1058920 (-) False G304369
TU348466 other upstream 813799 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 1121780 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 1471053 5153668 ~ 5154133 (-) True G306902

Expression Profile