RNA id: TU347442



Basic Information


Item Value
RNA id TU347442
length 269
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G305773
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2727437 ~ 2727705 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


NTGCTTGTACACTTTTATCTACCATATCTTTTCCTTCCCTTCGCCTCTTTATTAATGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCTTTTGTGTCTTGTCCTCCTTGTGCAAGGGGTCAATGGTCGTCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGATTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTGCAGGTGTTTTGAGTTAATTAGCTGATTAGAGTGTGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU347437 lncRNA downstream 8286 2718875 ~ 2719151 (-) True G305768
TU347436 lncRNA downstream 9233 2718002 ~ 2718204 (-) True G305767
TU347403 lncRNA downstream 237825 2489255 ~ 2489612 (-) True G305737
TU347402 lncRNA downstream 247272 2479939 ~ 2480165 (-) True G305736
TU346623 lncRNA downstream 248893 2478344 ~ 2478544 (-) True G305069
TU347444 lncRNA upstream 4928 2732633 ~ 2732835 (-) True G305775
TU347445 lncRNA upstream 5836 2733541 ~ 2733796 (-) True G305776
TU347449 lncRNA upstream 14861 2742566 ~ 2742814 (-) True G305780
TU347450 lncRNA upstream 19707 2747412 ~ 2747697 (-) True G305781
TU347506 lncRNA upstream 60777 2788482 ~ 2788852 (-) True G305831
CI01000092_02673622_02702051.mRNA mRNA downstream 25386 2673524 ~ 2702051 (-) True CI01000092_02673622_02702051
CI01000092_02616905_02658519.mRNA mRNA downstream 68563 2616818 ~ 2658874 (-) True CI01000092_02616905_02658519
CI01000092_02602158_02608405.mRNA mRNA downstream 119032 2601686 ~ 2608405 (-) True CI01000092_02602158_02608405
CI01000092_02570666_02599836.mRNA mRNA downstream 127601 2570196 ~ 2599836 (-) True CI01000092_02570666_02599836
CI01000092_02522204_02531634.mRNA mRNA downstream 195803 2522123 ~ 2531634 (-) True CI01000092_02522204_02531634
CI01000092_02750776_02767145.mRNA mRNA upstream 23035 2750740 ~ 2770053 (-) True CI01000092_02750776_02767145
CI01000092_02771083_02773297.mRNA mRNA upstream 43347 2771052 ~ 2777076 (-) True CI01000092_02771083_02773297
CI01000092_02839795_02842383.mRNA mRNA upstream 112054 2839759 ~ 2842409 (-) True CI01000092_02839795_02842383
CI01000092_02851435_02865690.mRNA mRNA upstream 122737 2850442 ~ 2865690 (-) True CI01000092_02851435_02865690
CI01000092_02868492_02873015.mRNA mRNA upstream 140768 2868473 ~ 2873015 (-) True CI01000092_02868492_02873015
TU347441 other downstream 2493 2724594 ~ 2724944 (-) True G305772
TU345950 other downstream 1495145 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 1630519 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 1668517 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 1668573 1058325 ~ 1058864 (-) False G304369
TU347691 other upstream 950169 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 1768709 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2076690 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 2425963 5153668 ~ 5154133 (-) True G306902

Expression Profile