RNA id: CI01000093_00372074_00372877.mRNA


Basic Information

Item Value
RNA id CI01000093_00372074_00372877.mRNA
length 1231
RNA type mRNA
GC content 0.46
exon number 1
gene id CI01000093_00372074_00372877
representative True

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 371795 ~ 373025 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGATCCGAACTGGTAGGTGAGGAGAAGATCTCAACATGTGGATGTTTTGCAAAGATAACTGTTTGTAGTTCACACAGGACCGTAAGAGTTCTCATCTCTCATACCAAGGCTGAGATTTGCATTTTGAAGTAGACAAAAGTGAACAACGATGAGTTTGGGCAGCACCAGTACAGAATCTGAAGTTTCAGAGGATGAGTTGGAGGATTGTCCTTTAGGTCCGGATGACGACTGTGACAACGAAAGCCCTGGAAAGCTTCGTTCAGAACGCTCAATGTCATCCGGCCCAAGTGACACAGAGGATGTCAAAGCGGTTAAGGGCCGAACTCGGCCTAAACGGTCCAAAGCACGGAGAGTCGCCGCCAACATCCGAGAACGGAAGCGCATTCTGGACTACAACCAGGCCTTCAACGCATTACGCACGGTCCTCAAACACGACCTTAGTGGAAAGCGCCTGTCCAAGATCGCCACGCTCCGCCGCGCCATCCAGCACATTTCAACACTGTCTTTGTATCTGCGAACACATTCGGATACAGAACCGCACCCACCTCCGTGTACTCATACGGAGTGCTATCGGCAGCCGGAAGAGAACAGTTCCCTGCCCAGGAAGACCGGAACTTTCCAGGAACCGATAGATAACTACATTCCCCATCAGCCAGAGCTCACAGTCTCTACAGAGATGTATCAGGACACATCAAACTCGACACCATCTCAACACTACAACCACTGCACCACCACCAGTCAGGAACACGTGAACCGTGGACACTTCGGTCAGCACTGGGAGGATCAGAGCCGTGATTACTACAGTGGAGGACCTGGATATCAACATGGGACGAGGGTCACCTGTCATCAGAACCATATGGACACTTATGCAGACTCTGCGAACCCGTCTTTGGCTTGGCAGCTGGGTTACCTTCAATGTCACGGACACCAGCAGTTCCTGAGTATGCACTAACTTTTCTCATGCTAGTTACTTTTGAAAAGCATTAGAAATTTTTGAATATAATAGTGTGCATTAAGAGTATTTTTGCATACATTTCTCAGGTTAAAAAATATACTGTATATTACAGCAAATGCCTGGTAAAAATCCTCTTCTATAATTGTTAGTTTATTGTAAATTGTAAATAATATTTTTAAAAAAGAATATGTCAGATATGTCAGAAATTAGCTTAAAGGTTAGCCTCAATATCTTGTTACCACTTATTTTTTTCCGTATGCTCAGCCCCCAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU349588 lncRNA downstream 7724 363629 ~ 364071 (-) True G307659
TU349577 lncRNA downstream 23842 347698 ~ 347953 (-) True G307648
TU349550 lncRNA downstream 32535 315273 ~ 339260 (-) True G307622
TU349430 lncRNA downstream 179869 191098 ~ 191926 (-) True G307522
TU349429 lncRNA downstream 182251 189305 ~ 189544 (-) True G307521
TU349544 lncRNA upstream 2883 375908 ~ 376290 (-) True G307617
TU349545 lncRNA upstream 6908 379933 ~ 380530 (-) True G307618
TU349591 lncRNA upstream 25481 398506 ~ 398939 (-) True G307662
TU349605 lncRNA upstream 30775 403800 ~ 404246 (-) True G307673
TU349603 lncRNA upstream 35768 408793 ~ 409143 (-) True G307671
CI01000093_00224221_00233968.mRNA mRNA downstream 135353 223865 ~ 236442 (-) True CI01000093_00224221_00233968
CI01000093_00044285_00045637.mRNA mRNA downstream 326143 44016 ~ 45652 (-) False CI01000093_00044285_00045637
CI01000093_00021721_00029528.mRNA mRNA downstream 342267 21721 ~ 29528 (-) True CI01000093_00021721_00029528
CI01000093_00000644_00001222.mRNA mRNA downstream 370573 469 ~ 1222 (-) True CI01000093_00000644_00001222
CI01000093_00441786_00443029.mRNA mRNA upstream 68343 441368 ~ 443590 (-) True CI01000093_00441786_00443029
CI01000093_00601248_00607534.mRNA mRNA upstream 228060 601085 ~ 607729 (-) True CI01000093_00601248_00607534
CI01000093_00633602_00642455.mRNA mRNA upstream 258601 631626 ~ 642522 (-) True CI01000093_00633602_00642455
CI01000093_00643216_00644177.mRNA mRNA upstream 269950 642975 ~ 644177 (-) True CI01000093_00643216_00644177
CI01000093_00693070_00700737.mRNA mRNA upstream 319044 692069 ~ 703605 (-) False CI01000093_00693070_00700737
TU349703 other upstream 694994 1073022 ~ 1073753 (-) True G307751

Expression Profile