RNA id: CI01000093_00441786_00443029.mRNA


Basic Information

Item Value
RNA id CI01000093_00441786_00443029.mRNA
length 1369
RNA type mRNA
GC content 0.42
exon number 3
gene id CI01000093_00441786_00443029
representative True

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 441368 ~ 443590 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATATTTCTGATGTAAATTACTGGCCTGACTGGGCTAAAAACCTGACTGTTAGTTCTGTTATCTTTTGTCTCCTTCTAGGCTTAATTTCACAGACGTGCACGAGGGGGAGTCGTCTAATTTAACTCATTAATGCCGTGTCAGCAGCCTTGCCGCAAAATCCTTCCCCGCACTGTCTCCAGGTGCCAAAGAAAACGACAACAACACGAGGCCACGTGAGCCAGACTGACGCCCGGACTCCAGCTCCCCGAACGCTCTTCAGGACTCACACGCAGGACCTACTTCCTGGAGATAACGGAGCAAAACGTCTAAAATAGAAAGATATGCCTCACTCTCGCTCTCTGTCTATCGCTCCATCTCTTTCTCACTCTCTCTCCCCATCCACTTTTAATCATTGGCTATTCAAAGATGAAAAGCCTTTCTGAAAGGGAAAATTTTATCCAAGTACTCCACATATGGCTTTTCTCTCTCCAAGAGTACGAACATGTCCTCAGAAACAAAAATGCCTTGTTTGACGTTCTAAAAAGAAAGATAGAGGTTGATTTAAGGTCAAGCTGACAACAAATGGACAAATCCTTTGGGACTAAAGAGTGGTTAGATCAAACTGGAAAGATAAGAAAGCCTTGCAAAGCTGATCTAGGAAATCTAGAAGAACAGTTGTGGTGCGAAGCCAAACTCAAGGTGAATTCTGCACTTCCTCAAAGCCAGCGAAAAATCCATAAGACAAAAAAAGCAGATCTCATGAATACTACAAGAGCCGAATCCACTTTGCGTAGCCGTAGCCGAGTCTCGCTCCTTGAAGATCCGTATCGCAGACAGATTGCCGTGTTTTGTATCAATATAATACCAGTTAGTGGATACAACAATGTGCTGATGAAAATCTGCCTCAAACCAGGGGAATGGGAGCCACGTAATAAGTGGGTAATTCCTGCCGAAGCATATCTTTGTGATTAAAAGCCTCTCTCGTGGAGTGCTATTCTTTGGGTTGGGCTTTCTGAACTGTGCGAAACCTATAGAGATCACTCTGTAATCTGAGGCCAGCCATTTTACCTCAGGCATTAATAATTCAACATCGACCATATTCACATTGGTACTGAGGGGACAATGGCATGTTTGAAAAATAATATATTTTTAGAAACCCAACAAGAATGCAGGCCGCTGGCAAGAGGATGTATTTTTCCAAGAGGCTTATTTAACAGACAACAAATACAGACCAATTCAGAGGAGAAAAACTTTGTGTTTGTTTATACTTTCACTAAAGGAACTGCCCTTAAGTGTTTGGTAAATTGCACAGTGCTTTGTAAGGATAAAAGCTCAAACTACGAACAGTCCCAGAAATTGCTCATGAAACAGAACTCTTAAGAAAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU349487 lncRNA downstream 14935 425760 ~ 426433 (-) True G307568
TU349603 lncRNA downstream 32225 408793 ~ 409143 (-) True G307671
TU349605 lncRNA downstream 37122 403800 ~ 404246 (-) True G307673
TU349591 lncRNA downstream 42429 398506 ~ 398939 (-) True G307662
TU349545 lncRNA downstream 60838 379933 ~ 380530 (-) True G307618
TU349595 lncRNA upstream 52184 495774 ~ 499206 (-) False G307665
TU349594 lncRNA upstream 52724 496314 ~ 499206 (-) True G307665
TU349667 lncRNA upstream 66171 509761 ~ 510131 (-) True G307715
TU349669 lncRNA upstream 67979 511569 ~ 511780 (-) True G307717
TU349670 lncRNA upstream 71480 515070 ~ 515432 (-) True G307718
CI01000093_00372074_00372877.mRNA mRNA downstream 68343 371795 ~ 373025 (-) True CI01000093_00372074_00372877
CI01000093_00224221_00233968.mRNA mRNA downstream 204926 223865 ~ 236442 (-) True CI01000093_00224221_00233968
CI01000093_00044285_00045637.mRNA mRNA downstream 395716 44016 ~ 45652 (-) False CI01000093_00044285_00045637
CI01000093_00021721_00029528.mRNA mRNA downstream 411840 21721 ~ 29528 (-) True CI01000093_00021721_00029528
CI01000093_00000644_00001222.mRNA mRNA downstream 440146 469 ~ 1222 (-) True CI01000093_00000644_00001222
CI01000093_00601248_00607534.mRNA mRNA upstream 157495 601085 ~ 607729 (-) True CI01000093_00601248_00607534
CI01000093_00633602_00642455.mRNA mRNA upstream 188036 631626 ~ 642522 (-) True CI01000093_00633602_00642455
CI01000093_00643216_00644177.mRNA mRNA upstream 199385 642975 ~ 644177 (-) True CI01000093_00643216_00644177
CI01000093_00693070_00700737.mRNA mRNA upstream 248479 692069 ~ 703605 (-) False CI01000093_00693070_00700737
CI01000093_00716586_00720543.mRNA mRNA upstream 272979 716569 ~ 720866 (-) True CI01000093_00716586_00720543
TU349703 other upstream 624429 1073022 ~ 1073753 (-) True G307751

Expression Profile