Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00017684 |
| length | 918 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | XLOC_008964 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 4036709 ~ 4037626 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ko04080 | Neuroactive ligand-receptor interaction |
| ko04030 | G protein-coupled receptors |
| ensembl_id | ENSDART00000160905 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019117 | lncRNA | downstream | 275752 | 3754566 ~ 3760957 (-) | True | XLOC_008957 |
| TCONS_00019116 | lncRNA | downstream | 874250 | 3160438 ~ 3162459 (-) | True | XLOC_008952 |
| TCONS_00019115 | lncRNA | downstream | 920447 | 3115337 ~ 3116262 (-) | True | XLOC_008951 |
| TCONS_00017662 | lncRNA | downstream | 1105688 | 2918257 ~ 2931021 (-) | True | XLOC_008946 |
| TCONS_00019114 | lncRNA | downstream | 1220567 | 2813516 ~ 2816142 (-) | True | XLOC_008942 |
| TCONS_00019118 | lncRNA | upstream | 125952 | 4163578 ~ 4174873 (-) | True | XLOC_008970 |
| TCONS_00017697 | lncRNA | upstream | 384855 | 4422481 ~ 4436431 (-) | False | XLOC_008974 |
| TCONS_00017701 | lncRNA | upstream | 391392 | 4429018 ~ 4445598 (-) | False | XLOC_008974 |
| TCONS_00017703 | lncRNA | upstream | 407434 | 4445060 ~ 4485867 (-) | True | XLOC_008974 |
| TCONS_00018810 | lncRNA | upstream | 1164625 | 5202251 ~ 5203167 (-) | True | XLOC_008986 |
| TCONS_00017683 | mRNA | downstream | 9342 | 4018362 ~ 4027367 (-) | True | XLOC_008963 |
| TCONS_00017682 | mRNA | downstream | 13527 | 4018362 ~ 4023182 (-) | False | XLOC_008963 |
| TCONS_00017681 | mRNA | downstream | 25696 | 4009572 ~ 4011013 (-) | True | XLOC_008962 |
| TCONS_00017680 | mRNA | downstream | 60674 | 3970797 ~ 3976035 (-) | True | XLOC_008961 |
| TCONS_00017678 | mRNA | downstream | 73060 | 3957876 ~ 3963649 (-) | False | XLOC_008960 |
| TCONS_00017685 | mRNA | upstream | 11596 | 4049222 ~ 4053149 (-) | True | XLOC_008965 |
| TCONS_00017686 | mRNA | upstream | 24374 | 4062000 ~ 4067158 (-) | True | XLOC_008966 |
| TCONS_00017687 | mRNA | upstream | 47997 | 4085623 ~ 4094888 (-) | True | XLOC_008967 |
| TCONS_00017688 | mRNA | upstream | 63628 | 4101254 ~ 4124099 (-) | False | XLOC_008968 |
| TCONS_00017690 | mRNA | upstream | 90934 | 4128560 ~ 4152582 (-) | True | XLOC_008969 |
| TCONS_00017655 | other | downstream | 1300211 | 2736383 ~ 2736498 (-) | True | XLOC_008940 |
| TCONS_00017647 | other | downstream | 1411046 | 2625028 ~ 2625663 (-) | True | XLOC_008933 |
| TCONS_00017639 | other | downstream | 1770626 | 2265969 ~ 2266083 (-) | True | XLOC_008927 |
| TCONS_00017627 | other | downstream | 2198826 | 1834971 ~ 1837883 (-) | True | XLOC_008922 |
| TCONS_00017597 | other | downstream | 2714803 | 1321790 ~ 1321906 (-) | True | XLOC_008910 |
| TCONS_00017689 | other | upstream | 66782 | 4104408 ~ 4104526 (-) | True | XLOC_008968 |
| TCONS_00017694 | other | upstream | 327532 | 4365158 ~ 4365272 (-) | True | XLOC_008973 |
| TCONS_00017700 | other | upstream | 388868 | 4426494 ~ 4482147 (-) | False | XLOC_008974 |
| TCONS_00017702 | other | upstream | 397839 | 4435465 ~ 4482230 (-) | False | XLOC_008974 |
| TCONS_00017735 | other | upstream | 1345436 | 5383062 ~ 5383180 (-) | True | XLOC_008997 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000092_01266540_01267541.mRNA | True | 2122 | mRNA | 0.39 | 1 | CI01000092 | 1266358 ~ 1268479 (-) |
