Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00017771 |
| length | 1248 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 9 |
| gene id | XLOC_009013 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 6948644 ~ 6966245 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005763 | mitochondrial small ribosomal subunit | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070615-31 | Predicted to be a structural constituent of ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 5 and ovarian dysgenesis 7. Orthologous to human MRPS22 (mitochondrial ribosomal protein S22). |
| ensembl_id | ENSDART00000027657 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019119 | lncRNA | downstream | 1046662 | 5898410 ~ 5901982 (-) | False | XLOC_009008 |
| TCONS_00017759 | lncRNA | downstream | 1047159 | 5898410 ~ 5901485 (-) | False | XLOC_009008 |
| TCONS_00017758 | lncRNA | downstream | 1047166 | 5898904 ~ 5901478 (-) | False | XLOC_009008 |
| TCONS_00017760 | lncRNA | downstream | 1047166 | 5899186 ~ 5901478 (-) | True | XLOC_009008 |
| TCONS_00017753 | lncRNA | downstream | 1150726 | 5794963 ~ 5797918 (-) | True | XLOC_009005 |
| TCONS_00017775 | lncRNA | upstream | 2136 | 6968381 ~ 6976921 (-) | False | XLOC_009014 |
| TCONS_00017779 | lncRNA | upstream | 65852 | 7032097 ~ 7034722 (-) | True | XLOC_009016 |
| TCONS_00019120 | lncRNA | upstream | 98223 | 7064468 ~ 7065313 (-) | True | XLOC_009017 |
| TCONS_00019121 | lncRNA | upstream | 1383784 | 8350029 ~ 8394601 (-) | True | XLOC_009023 |
| TCONS_00019122 | lncRNA | upstream | 1633346 | 8599591 ~ 8602094 (-) | True | XLOC_009025 |
| TCONS_00017768 | mRNA | downstream | 2358 | 6926987 ~ 6946286 (-) | False | XLOC_009012 |
| TCONS_00017765 | mRNA | downstream | 85327 | 6838039 ~ 6863317 (-) | False | XLOC_009011 |
| TCONS_00017766 | mRNA | downstream | 85327 | 6838264 ~ 6863317 (-) | False | XLOC_009011 |
| TCONS_00017767 | mRNA | downstream | 85494 | 6854681 ~ 6863150 (-) | True | XLOC_009011 |
| TCONS_00017764 | mRNA | downstream | 297651 | 6515400 ~ 6650993 (-) | True | XLOC_009010 |
| TCONS_00017776 | mRNA | upstream | 2386 | 6968631 ~ 6976921 (-) | False | XLOC_009014 |
| TCONS_00017777 | mRNA | upstream | 3530 | 6969775 ~ 6976851 (-) | True | XLOC_009014 |
| TCONS_00017780 | mRNA | upstream | 333511 | 7299756 ~ 7337537 (-) | False | XLOC_009018 |
| TCONS_00017781 | mRNA | upstream | 348362 | 7314607 ~ 7337148 (-) | True | XLOC_009018 |
| TCONS_00017782 | mRNA | upstream | 418275 | 7384520 ~ 7598294 (-) | False | XLOC_009019 |
| TCONS_00017769 | other | downstream | 2553 | 6927018 ~ 6946091 (-) | False | XLOC_009012 |
| TCONS_00017770 | other | downstream | 7717 | 6938888 ~ 6940927 (-) | True | XLOC_009012 |
| TCONS_00017752 | other | downstream | 1153229 | 5789338 ~ 5795415 (-) | False | XLOC_009005 |
| TCONS_00017735 | other | downstream | 1565464 | 5383062 ~ 5383180 (-) | True | XLOC_008997 |
| TCONS_00017702 | other | downstream | 2466414 | 4435465 ~ 4482230 (-) | False | XLOC_008974 |
| TCONS_00017778 | other | upstream | 42577 | 7008822 ~ 7008938 (-) | True | XLOC_009015 |
| TCONS_00017797 | other | upstream | 1873257 | 8839502 ~ 8856379 (-) | True | XLOC_009027 |
| TCONS_00017798 | other | upstream | 2021398 | 8987643 ~ 8987759 (-) | True | XLOC_009028 |
| TCONS_00017810 | other | upstream | 2635392 | 9601637 ~ 9619953 (-) | False | XLOC_009037 |
| TCONS_00017819 | other | upstream | 3219809 | 10186054 ~ 10186169 (-) | True | XLOC_009039 |
