RNA id: TCONS_00017819


Basic Information

Item Value
RNA id TCONS_00017819
length 116
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_009039
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 10186054 ~ 10186169 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTCCACAGctatatcaccctgcagctcaagGCGGTTACTTATTGAAGCTAAGCTGGGCTGAGCCTGGTCTGTACCTGGATGGGTGATCacttgggaaaactaggttgctgttagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175901

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019123 lncRNA downstream 994777 9189153 ~ 9191277 (-) True XLOC_009031
TCONS_00019122 lncRNA downstream 1583960 8599591 ~ 8602094 (-) True XLOC_009025
TCONS_00019121 lncRNA downstream 1791453 8350029 ~ 8394601 (-) True XLOC_009023
TCONS_00019120 lncRNA downstream 3120741 7064468 ~ 7065313 (-) True XLOC_009017
TCONS_00017779 lncRNA downstream 3151332 7032097 ~ 7034722 (-) True XLOC_009016
TCONS_00018812 lncRNA upstream 260488 10446657 ~ 10448625 (-) False XLOC_009038
TCONS_00017821 lncRNA upstream 570041 10756210 ~ 10759101 (-) True XLOC_009040
TCONS_00017822 lncRNA upstream 787548 10973717 ~ 10985904 (-) False XLOC_009041
TCONS_00018813 lncRNA upstream 798096 10984265 ~ 10985904 (-) False XLOC_009041
TCONS_00018814 lncRNA upstream 798096 10984265 ~ 10986106 (-) True XLOC_009041
TCONS_00017811 mRNA downstream 554462 9601643 ~ 9631592 (-) True XLOC_009037
TCONS_00017809 mRNA downstream 592522 9444982 ~ 9593532 (-) True XLOC_009036
TCONS_00017808 mRNA downstream 764573 9370988 ~ 9421481 (-) False XLOC_009035
TCONS_00017807 mRNA downstream 764573 9370988 ~ 9421481 (-) True XLOC_009035
TCONS_00017806 mRNA downstream 766582 9367101 ~ 9419472 (-) False XLOC_009035
TCONS_00017820 mRNA upstream 260686 10446855 ~ 10455438 (-) True XLOC_009038
TCONS_00017824 mRNA upstream 1032077 11218246 ~ 11303691 (-) True XLOC_009043
TCONS_00017825 mRNA upstream 1122293 11308462 ~ 11341635 (-) True XLOC_009044
TCONS_00017826 mRNA upstream 1493590 11679759 ~ 11683529 (-) False XLOC_009046
TCONS_00017827 mRNA upstream 1493680 11679849 ~ 11681653 (-) True XLOC_009046
TCONS_00017810 other downstream 566101 9601637 ~ 9619953 (-) False XLOC_009037
TCONS_00017798 other downstream 1198295 8987643 ~ 8987759 (-) True XLOC_009028
TCONS_00017797 other downstream 1329675 8839502 ~ 8856379 (-) True XLOC_009027
TCONS_00017778 other downstream 3177116 7008822 ~ 7008938 (-) True XLOC_009015
TCONS_00017773 other downstream 3219809 6948893 ~ 6966245 (-) False XLOC_009013
TCONS_00017830 other upstream 1789974 11976143 ~ 11976260 (-) True XLOC_009050
TCONS_00017854 other upstream 3638303 13824472 ~ 13824604 (-) True XLOC_009061
TCONS_00017858 other upstream 3890370 14076539 ~ 14083113 (-) False XLOC_009064
TCONS_00017866 other upstream 3999219 14185388 ~ 14193896 (-) False XLOC_009066
TCONS_00017874 other upstream 4129185 14315354 ~ 14315470 (-) True XLOC_009071