RNA id: TCONS_00017854


Basic Information

Item Value
RNA id TCONS_00017854
length 133
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_009061
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 13824472 ~ 13824604 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aTTTCTGGATATTCCATCCCCGGCAGCTAGCTCACTGCATCTCtaacatggttgcccactgaagctaagcgaggttgtgcccggtcagtacctgtgtagaagaccacatgggaaagctaggctgctggaagtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119493

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019129 lncRNA downstream 616060 13206185 ~ 13208412 (-) False XLOC_009060
TCONS_00019130 lncRNA downstream 616060 13206623 ~ 13208412 (-) True XLOC_009060
TCONS_00017847 lncRNA downstream 1278789 12516188 ~ 12545683 (-) False XLOC_009059
TCONS_00017849 lncRNA downstream 1278789 12526417 ~ 12545683 (-) True XLOC_009059
TCONS_00017845 lncRNA downstream 1408334 12410984 ~ 12416138 (-) True XLOC_009057
TCONS_00017856 lncRNA upstream 238009 14062613 ~ 14064302 (-) False XLOC_009063
TCONS_00019131 lncRNA upstream 238009 14062613 ~ 14064350 (-) True XLOC_009063
TCONS_00019132 lncRNA upstream 404644 14229248 ~ 14232070 (-) True XLOC_009068
TCONS_00017870 lncRNA upstream 421486 14246090 ~ 14248047 (-) True XLOC_009069
TCONS_00017885 lncRNA upstream 855451 14680055 ~ 14696775 (-) True XLOC_009077
TCONS_00017853 mRNA downstream 569992 13129922 ~ 13254480 (-) False XLOC_009060
TCONS_00017850 mRNA downstream 570748 13107342 ~ 13253724 (-) False XLOC_009060
TCONS_00017852 mRNA downstream 570748 13127130 ~ 13253724 (-) False XLOC_009060
TCONS_00017851 mRNA downstream 615865 13107347 ~ 13208607 (-) False XLOC_009060
TCONS_00017848 mRNA downstream 1278789 12522841 ~ 12545683 (-) False XLOC_009059
TCONS_00017855 mRNA upstream 209650 14034254 ~ 14038227 (-) True XLOC_009062
TCONS_00017857 mRNA upstream 251400 14076004 ~ 14083140 (-) False XLOC_009064
TCONS_00017859 mRNA upstream 255333 14079937 ~ 14083140 (-) False XLOC_009064
TCONS_00017860 mRNA upstream 257574 14082178 ~ 14083028 (-) True XLOC_009064
TCONS_00017861 mRNA upstream 260583 14085187 ~ 14098522 (-) True XLOC_009065
TCONS_00017830 other downstream 1848212 11976143 ~ 11976260 (-) True XLOC_009050
TCONS_00017819 other downstream 3638303 10186054 ~ 10186169 (-) True XLOC_009039
TCONS_00017810 other downstream 4204519 9601637 ~ 9619953 (-) False XLOC_009037
TCONS_00017798 other downstream 4836713 8987643 ~ 8987759 (-) True XLOC_009028
TCONS_00017797 other downstream 4968093 8839502 ~ 8856379 (-) True XLOC_009027
TCONS_00017858 other upstream 251935 14076539 ~ 14083113 (-) False XLOC_009064
TCONS_00017866 other upstream 360784 14185388 ~ 14193896 (-) False XLOC_009066
TCONS_00017874 other upstream 490750 14315354 ~ 14315470 (-) True XLOC_009071
TCONS_00017882 other upstream 811065 14635669 ~ 14635785 (-) True XLOC_009076
TCONS_00017891 other upstream 1396879 15221483 ~ 15224702 (-) False XLOC_009082