RNA id: TCONS_00018243


Basic Information

Item Value
RNA id TCONS_00018243
length 116
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_009281
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 27922978 ~ 27923093 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatatcatccTGAAACCTaggactggttactcactgaggCTAAGCAGGGCTGAACCTAGTCAGTACTGGATGGGTGACcatatgggaaaactaggttactgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176174

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019179 lncRNA downstream 38301 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019178 lncRNA downstream 38301 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019177 lncRNA downstream 38301 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019182 lncRNA downstream 38301 27841020 ~ 27884677 (-) True XLOC_009280
TCONS_00018830 lncRNA downstream 261861 27660245 ~ 27661117 (-) True XLOC_009278
TCONS_00019183 lncRNA upstream 87637 28010730 ~ 28015128 (-) True XLOC_009284
TCONS_00018263 lncRNA upstream 433752 28356845 ~ 28357872 (-) True XLOC_009291
TCONS_00019184 lncRNA upstream 576953 28500046 ~ 28541766 (-) True XLOC_009294
TCONS_00019185 lncRNA upstream 671450 28594543 ~ 28596484 (-) False XLOC_009296
TCONS_00018270 lncRNA upstream 671450 28594543 ~ 28596509 (-) True XLOC_009296
TCONS_00018242 mRNA downstream 212403 27708739 ~ 27710575 (-) True XLOC_009279
TCONS_00018241 mRNA downstream 212465 27703409 ~ 27710513 (-) False XLOC_009279
TCONS_00018230 mRNA downstream 400140 27415772 ~ 27522838 (-) False XLOC_009274
TCONS_00018244 mRNA upstream 48205 27971298 ~ 27972474 (-) True XLOC_009282
TCONS_00018245 mRNA upstream 83675 28006768 ~ 28082310 (-) False XLOC_009283
TCONS_00018246 mRNA upstream 135898 28058991 ~ 28085563 (-) False XLOC_009283
TCONS_00018247 mRNA upstream 155953 28079046 ~ 28085480 (-) True XLOC_009283
TCONS_00018248 mRNA upstream 163100 28086193 ~ 28095532 (-) False XLOC_009285
TCONS_00018240 other downstream 268686 27654176 ~ 27654292 (-) True XLOC_009277
TCONS_00018239 other downstream 276442 27646419 ~ 27646536 (-) True XLOC_009276
TCONS_00018201 other downstream 1624231 26298629 ~ 26298747 (-) True XLOC_009260
TCONS_00018200 other downstream 1648221 26274640 ~ 26274757 (-) True XLOC_009259
TCONS_00018199 other downstream 1847498 26075363 ~ 26075480 (-) True XLOC_009257
TCONS_00018264 other upstream 452420 28375513 ~ 28375627 (-) True XLOC_009292
TCONS_00018276 other upstream 811834 28734927 ~ 28735041 (-) True XLOC_009299
TCONS_00018305 other upstream 1462040 29385133 ~ 29386439 (-) True XLOC_009309
TCONS_00018320 other upstream 1747099 29670192 ~ 29670306 (-) True XLOC_009318
TCONS_00018322 other upstream 1954181 29877274 ~ 29877388 (-) True XLOC_009321

Expression Profile

//