RNA id: TCONS_00018244


Basic Information

Item Value
RNA id TCONS_00018244
length 1177
RNA type mRNA
GC content 0.47
exon number 1
gene id XLOC_009282
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 27971298 ~ 27972474 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atccatccatccatccaatgttctattattttatccatccatccgtccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatcaatccagccagccagccagccagccagccagccaatgTTCTATTATTcaatccatttgtccatccatccctccaatATTctgttattccatccatccatccatccatccatccatccatccatccatccatccatccattcatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccattcatccagccATCCACAAGCCAGCCAGCCAATTTTCTattattccatccattcatccacccacctacccatccagccagccagccaatgTTCTATTATTcaatccatttgtccatccatccctccaatATTctgttattccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccattcatccagccATCCACAAGCCAGCCAGCCAATTTTCTattattccatccattcatccacccacctacccatccatccagccagccagccagccaatgTTCTATTATtcaatcattccatccatccatccatctctccaatGTTctgttattccatccatccatccatccatccagccatccatccagccatccaccagccagccagccagccagccagccggCCAGCCAATGTTCTATTatgtaatccatccatccatccctccaatGTTctgttattccatccatccattcatccattcatccatccatccatccagccatccaccagccagccagccagccagccagccagccagccaatgTTCTattattccatccattcatccacccatccacccacccatccatccatccatccatccatccatccactttatCCATGTGTCTAATCTATCCACCCGTTGTTTTATGCTATCCATATACTATTCTGCCTGATGTTCTGTCCATCTGCATGCACCCATCTATCTAGTTTTTATCAATACAATTtatcattcatccatcatttaaTTTTGTGTCagatctatctatttgtctgtccgtccgtccatgtGTCATGTTCTGTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000162753

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019180 lncRNA downstream 15136 27784550 ~ 27956162 (-) False XLOC_009280
TCONS_00019181 lncRNA downstream 15279 27791127 ~ 27956019 (-) False XLOC_009280
TCONS_00019179 lncRNA downstream 86621 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019178 lncRNA downstream 86621 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019177 lncRNA downstream 86621 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019183 lncRNA upstream 38256 28010730 ~ 28015128 (-) True XLOC_009284
TCONS_00018263 lncRNA upstream 384371 28356845 ~ 28357872 (-) True XLOC_009291
TCONS_00019184 lncRNA upstream 527572 28500046 ~ 28541766 (-) True XLOC_009294
TCONS_00019185 lncRNA upstream 622069 28594543 ~ 28596484 (-) False XLOC_009296
TCONS_00018270 lncRNA upstream 622069 28594543 ~ 28596509 (-) True XLOC_009296
TCONS_00018242 mRNA downstream 260723 27708739 ~ 27710575 (-) True XLOC_009279
TCONS_00018241 mRNA downstream 260785 27703409 ~ 27710513 (-) False XLOC_009279
TCONS_00018230 mRNA downstream 448460 27415772 ~ 27522838 (-) False XLOC_009274
TCONS_00018245 mRNA upstream 34294 28006768 ~ 28082310 (-) False XLOC_009283
TCONS_00018246 mRNA upstream 86517 28058991 ~ 28085563 (-) False XLOC_009283
TCONS_00018247 mRNA upstream 106572 28079046 ~ 28085480 (-) True XLOC_009283
TCONS_00018248 mRNA upstream 113719 28086193 ~ 28095532 (-) False XLOC_009285
TCONS_00018249 mRNA upstream 113719 28086193 ~ 28107505 (-) False XLOC_009285
TCONS_00018243 other downstream 48205 27922978 ~ 27923093 (-) True XLOC_009281
TCONS_00018240 other downstream 317006 27654176 ~ 27654292 (-) True XLOC_009277
TCONS_00018239 other downstream 324762 27646419 ~ 27646536 (-) True XLOC_009276
TCONS_00018201 other downstream 1672551 26298629 ~ 26298747 (-) True XLOC_009260
TCONS_00018200 other downstream 1696541 26274640 ~ 26274757 (-) True XLOC_009259
TCONS_00018264 other upstream 403039 28375513 ~ 28375627 (-) True XLOC_009292
TCONS_00018276 other upstream 762453 28734927 ~ 28735041 (-) True XLOC_009299
TCONS_00018305 other upstream 1412659 29385133 ~ 29386439 (-) True XLOC_009309
TCONS_00018320 other upstream 1697718 29670192 ~ 29670306 (-) True XLOC_009318
TCONS_00018322 other upstream 1904800 29877274 ~ 29877388 (-) True XLOC_009321

Expression Profile

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