RNA id: TCONS_00018264


Basic Information

Item Value
RNA id TCONS_00018264
length 115
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_009292
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 28375513 ~ 28375627 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ctcggcagctagctctctgcaactctcacatggtcacccactaaaGTTAAGCAGGACTGCGCCTGGTCAGTTCctgcatgggagaccacatggaaaagcttgGTTGCTGTCGGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181400

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018263 lncRNA downstream 17641 28356845 ~ 28357872 (-) True XLOC_009291
TCONS_00019183 lncRNA downstream 360385 28010730 ~ 28015128 (-) True XLOC_009284
TCONS_00019180 lncRNA downstream 419351 27784550 ~ 27956162 (-) False XLOC_009280
TCONS_00019181 lncRNA downstream 419494 27791127 ~ 27956019 (-) False XLOC_009280
TCONS_00019179 lncRNA downstream 490836 27784550 ~ 27884677 (-) False XLOC_009280
TCONS_00019184 lncRNA upstream 124419 28500046 ~ 28541766 (-) True XLOC_009294
TCONS_00019185 lncRNA upstream 218916 28594543 ~ 28596484 (-) False XLOC_009296
TCONS_00018270 lncRNA upstream 218916 28594543 ~ 28596509 (-) True XLOC_009296
TCONS_00018273 lncRNA upstream 241097 28616724 ~ 28617733 (-) False XLOC_009297
TCONS_00018272 lncRNA upstream 241097 28616724 ~ 28618241 (-) True XLOC_009297
TCONS_00018261 mRNA downstream 112804 28248052 ~ 28262709 (-) False XLOC_009290
TCONS_00018262 mRNA downstream 112881 28249167 ~ 28262632 (-) True XLOC_009290
TCONS_00018260 mRNA downstream 127930 28227058 ~ 28247583 (-) True XLOC_009289
TCONS_00018259 mRNA downstream 151607 28209966 ~ 28223906 (-) True XLOC_009288
TCONS_00018258 mRNA downstream 151756 28208440 ~ 28223757 (-) False XLOC_009288
TCONS_00018265 mRNA upstream 55994 28431621 ~ 28480576 (-) False XLOC_009293
TCONS_00018266 mRNA upstream 56036 28431663 ~ 28480546 (-) True XLOC_009293
TCONS_00018267 mRNA upstream 169516 28545143 ~ 28569786 (-) False XLOC_009295
TCONS_00018268 mRNA upstream 169516 28545143 ~ 28587490 (-) False XLOC_009295
TCONS_00018269 mRNA upstream 173001 28548628 ~ 28587147 (-) True XLOC_009295
TCONS_00018243 other downstream 452420 27922978 ~ 27923093 (-) True XLOC_009281
TCONS_00018240 other downstream 721221 27654176 ~ 27654292 (-) True XLOC_009277
TCONS_00018239 other downstream 728977 27646419 ~ 27646536 (-) True XLOC_009276
TCONS_00018201 other downstream 2076766 26298629 ~ 26298747 (-) True XLOC_009260
TCONS_00018200 other downstream 2100756 26274640 ~ 26274757 (-) True XLOC_009259
TCONS_00018276 other upstream 359300 28734927 ~ 28735041 (-) True XLOC_009299
TCONS_00018305 other upstream 1009506 29385133 ~ 29386439 (-) True XLOC_009309
TCONS_00018320 other upstream 1294565 29670192 ~ 29670306 (-) True XLOC_009318
TCONS_00018322 other upstream 1501647 29877274 ~ 29877388 (-) True XLOC_009321
TCONS_00018344 other upstream 2468762 30844389 ~ 30849163 (-) True XLOC_009328