Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018280 |
| length | 1048 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 3 |
| gene id | XLOC_009298 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 28634580 ~ 28805493 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009636 | response to toxic substance | biological_process |
| GO:0043418 | homocysteine catabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008234 | cysteine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ko01002 | Peptidases and inhibitors |
| ensembl_id | ENSDART00000122536 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019186 | lncRNA | downstream | 1499 | 28707287 ~ 28785593 (-) | False | XLOC_009298 |
| TCONS_00019187 | lncRNA | downstream | 1499 | 28714092 ~ 28785593 (-) | False | XLOC_009298 |
| TCONS_00019188 | lncRNA | downstream | 1499 | 28726897 ~ 28785593 (-) | False | XLOC_009298 |
| TCONS_00019190 | lncRNA | downstream | 14518 | 28758455 ~ 28772574 (-) | False | XLOC_009300 |
| TCONS_00019189 | lncRNA | downstream | 14518 | 28758455 ~ 28772574 (-) | True | XLOC_009300 |
| TCONS_00018288 | lncRNA | upstream | 89509 | 28891716 ~ 28896925 (-) | True | XLOC_009302 |
| TCONS_00019191 | lncRNA | upstream | 202837 | 29005044 ~ 29009059 (-) | True | XLOC_009303 |
| TCONS_00018295 | lncRNA | upstream | 353855 | 29156062 ~ 29162253 (-) | False | XLOC_009306 |
| TCONS_00018298 | lncRNA | upstream | 520013 | 29322220 ~ 29322866 (-) | True | XLOC_009307 |
| TCONS_00018303 | lncRNA | upstream | 581508 | 29383715 ~ 29384612 (-) | False | XLOC_009309 |
| TCONS_00018275 | mRNA | downstream | 1580 | 28674477 ~ 28785512 (-) | False | XLOC_009298 |
| TCONS_00018274 | mRNA | downstream | 109367 | 28634580 ~ 28677725 (-) | False | XLOC_009298 |
| TCONS_00018271 | mRNA | downstream | 168590 | 28609025 ~ 28618502 (-) | False | XLOC_009297 |
| TCONS_00018268 | mRNA | downstream | 199602 | 28545143 ~ 28587490 (-) | False | XLOC_009295 |
| TCONS_00018284 | mRNA | upstream | 20529 | 28822736 ~ 28860282 (-) | True | XLOC_009301 |
| TCONS_00018285 | mRNA | upstream | 72234 | 28874441 ~ 28908027 (-) | False | XLOC_009302 |
| TCONS_00018286 | mRNA | upstream | 76857 | 28879064 ~ 28908027 (-) | False | XLOC_009302 |
| TCONS_00018287 | mRNA | upstream | 78931 | 28881138 ~ 28904371 (-) | False | XLOC_009302 |
| TCONS_00018289 | mRNA | upstream | 209083 | 29011290 ~ 29012493 (-) | True | XLOC_009304 |
| TCONS_00018276 | other | downstream | 52051 | 28734927 ~ 28735041 (-) | True | XLOC_009299 |
| TCONS_00018264 | other | downstream | 411465 | 28375513 ~ 28375627 (-) | True | XLOC_009292 |
| TCONS_00018243 | other | downstream | 863999 | 27922978 ~ 27923093 (-) | True | XLOC_009281 |
| TCONS_00018240 | other | downstream | 1132800 | 27654176 ~ 27654292 (-) | True | XLOC_009277 |
| TCONS_00018239 | other | downstream | 1140556 | 27646419 ~ 27646536 (-) | True | XLOC_009276 |
| TCONS_00018305 | other | upstream | 582926 | 29385133 ~ 29386439 (-) | True | XLOC_009309 |
| TCONS_00018320 | other | upstream | 867985 | 29670192 ~ 29670306 (-) | True | XLOC_009318 |
| TCONS_00018322 | other | upstream | 1075067 | 29877274 ~ 29877388 (-) | True | XLOC_009321 |
| TCONS_00018344 | other | upstream | 2042182 | 30844389 ~ 30849163 (-) | True | XLOC_009328 |
| TCONS_00018355 | other | upstream | 2260350 | 31062557 ~ 31067406 (-) | True | XLOC_009336 |
