RNA id: TCONS_00018320


Basic Information

Item Value
RNA id TCONS_00018320
length 115
RNA type rRNA
GC content 0.60
exon number 1
gene id XLOC_009318
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 29670192 ~ 29670306 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccggcagctagctctctgcagctctcacatgatcgcccactgaagccaagcatGGCTGCgaccggtcagtacctggatgggaggccacatgggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190643

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018316 lncRNA downstream 2983 29652022 ~ 29667209 (-) True XLOC_009317
TCONS_00018317 lncRNA downstream 4380 29664007 ~ 29665812 (-) False XLOC_009316
TCONS_00018318 lncRNA downstream 4380 29664862 ~ 29665812 (-) False XLOC_009316
TCONS_00018319 lncRNA downstream 4380 29664955 ~ 29665812 (-) True XLOC_009316
TCONS_00018315 lncRNA downstream 5493 29649515 ~ 29664699 (-) False XLOC_009316
TCONS_00019193 lncRNA upstream 38993 29709299 ~ 29714528 (-) True XLOC_009319
TCONS_00018321 lncRNA upstream 100305 29770611 ~ 29776205 (-) False XLOC_009320
TCONS_00019194 lncRNA upstream 100305 29770611 ~ 29811807 (-) False XLOC_009320
TCONS_00019195 lncRNA upstream 100305 29770611 ~ 29820800 (-) True XLOC_009320
TCONS_00018323 lncRNA upstream 216117 29886423 ~ 30117669 (-) False XLOC_009322
TCONS_00018313 mRNA downstream 71513 29595719 ~ 29598679 (-) True XLOC_009315
TCONS_00018312 mRNA downstream 71748 29593547 ~ 29598444 (-) False XLOC_009315
TCONS_00018310 mRNA downstream 83445 29564364 ~ 29586747 (-) False XLOC_009314
TCONS_00018311 mRNA downstream 96925 29564374 ~ 29573267 (-) True XLOC_009314
TCONS_00018308 mRNA downstream 113435 29549115 ~ 29556757 (-) False XLOC_009313
TCONS_00018326 mRNA upstream 754339 30424645 ~ 30816556 (-) False XLOC_009327
TCONS_00018327 mRNA upstream 755380 30425686 ~ 30505607 (-) False XLOC_009327
TCONS_00018328 mRNA upstream 755569 30425875 ~ 30450898 (-) False XLOC_009327
TCONS_00018329 mRNA upstream 755846 30426152 ~ 30815826 (-) False XLOC_009327
TCONS_00018330 mRNA upstream 765318 30435624 ~ 30714142 (-) False XLOC_009327
TCONS_00018305 other downstream 283753 29385133 ~ 29386439 (-) True XLOC_009309
TCONS_00018276 other downstream 935151 28734927 ~ 28735041 (-) True XLOC_009299
TCONS_00018264 other downstream 1294565 28375513 ~ 28375627 (-) True XLOC_009292
TCONS_00018243 other downstream 1747099 27922978 ~ 27923093 (-) True XLOC_009281
TCONS_00018240 other downstream 2015900 27654176 ~ 27654292 (-) True XLOC_009277
TCONS_00018322 other upstream 206968 29877274 ~ 29877388 (-) True XLOC_009321
TCONS_00018344 other upstream 1174083 30844389 ~ 30849163 (-) True XLOC_009328
TCONS_00018355 other upstream 1392251 31062557 ~ 31067406 (-) True XLOC_009336
TCONS_00018367 other upstream 1536132 31206438 ~ 31237395 (-) True XLOC_009339
TCONS_00018370 other upstream 1629257 31299563 ~ 31299678 (-) True XLOC_009342