RNA id: TCONS_00018370


Basic Information

Item Value
RNA id TCONS_00018370
length 116
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_009342
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 31299563 ~ 31299678 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccagcagctagctctctgcaactctcacatggtcgccctcCGAAGCTAAGGAGGGCTGTGcacggtcagtacctggatggaagaccacatgggaaagctagggttactgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179070

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018361 lncRNA downstream 132052 31166695 ~ 31167511 (-) True XLOC_009338
TCONS_00018351 lncRNA downstream 286851 31005981 ~ 31012712 (-) True XLOC_009333
TCONS_00019204 lncRNA downstream 375474 30923150 ~ 30924089 (-) True XLOC_009331
TCONS_00019203 lncRNA downstream 384302 30911402 ~ 30915261 (-) True XLOC_009330
TCONS_00018343 lncRNA downstream 450981 30844108 ~ 30848582 (-) False XLOC_009328
TCONS_00018395 lncRNA upstream 214528 31514206 ~ 31516514 (-) True XLOC_009359
TCONS_00018398 lncRNA upstream 285720 31585398 ~ 31587989 (-) True XLOC_009361
TCONS_00019205 lncRNA upstream 1113636 32413314 ~ 32433673 (-) True XLOC_009364
TCONS_00018405 lncRNA upstream 1333612 32633290 ~ 32634932 (-) False XLOC_009366
TCONS_00019206 lncRNA upstream 1333612 32633290 ~ 32635777 (-) False XLOC_009366
TCONS_00018369 mRNA downstream 11593 31282220 ~ 31287970 (-) True XLOC_009341
TCONS_00018368 mRNA downstream 34188 31244025 ~ 31265375 (-) True XLOC_009340
TCONS_00018364 mRNA downstream 62090 31188250 ~ 31237473 (-) False XLOC_009339
TCONS_00018366 mRNA downstream 62090 31188434 ~ 31237473 (-) False XLOC_009339
TCONS_00018365 mRNA downstream 62090 31188434 ~ 31237473 (-) False XLOC_009339
TCONS_00018371 mRNA upstream 12038 31311716 ~ 31313932 (-) True XLOC_009343
TCONS_00018373 mRNA upstream 17680 31317358 ~ 31319276 (-) True XLOC_009345
TCONS_00018374 mRNA upstream 20339 31320017 ~ 31323932 (-) True XLOC_009346
TCONS_00018375 mRNA upstream 31678 31331356 ~ 31364729 (-) False XLOC_009347
TCONS_00018376 mRNA upstream 50444 31350122 ~ 31352129 (-) False XLOC_009347
TCONS_00018367 other downstream 62168 31206438 ~ 31237395 (-) True XLOC_009339
TCONS_00018355 other downstream 232157 31062557 ~ 31067406 (-) True XLOC_009336
TCONS_00018344 other downstream 450400 30844389 ~ 30849163 (-) True XLOC_009328
TCONS_00018322 other downstream 1422175 29877274 ~ 29877388 (-) True XLOC_009321
TCONS_00018320 other downstream 1629257 29670192 ~ 29670306 (-) True XLOC_009318
TCONS_00018372 other upstream 15531 31315209 ~ 31315548 (-) True XLOC_009344
TCONS_00018378 other upstream 62109 31361787 ~ 31362141 (-) True XLOC_009348
TCONS_00018396 other upstream 248056 31547734 ~ 31547852 (-) True XLOC_009360
TCONS_00018399 other upstream 763614 32063292 ~ 32063409 (-) True XLOC_009362
TCONS_00018418 other upstream 2363377 33663055 ~ 33663172 (-) True XLOC_009370