RNA id: TU432098


Basic Information

Item Value
RNA id TU432098
length 668
lncRNA type read_through
GC content 0.42
exon number 2
gene id G378074
representative False

Chromosome Information

Item Value
chromosome id CI01000185
NCBI id null
chromosome length 228139
location 35885 ~ 52802 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCACCCGGTGTCTTGATCTTCTCCTTTAACTCTTTGATTTCATTCTCTCTCTCACTCAGTTTCTCCTCTAGTTCATCCCTGACTCTCTTCTCTGGAGCTCTCATATATGTCTGGAGTGAATAGTGTTCAGGATTCATTCTCTCTATACAATCCAGCATCTTTGAGATCTGACTGGAGTTTCTCTGGTCCTTTAACCCCATCACATTGTACCAACTCCCATAGAGATTCGCAACACTCTGAGATTGTGCAGATGCTACAAAATCTGACACACTTTTATCATCAGTGAGTTCAGTAATGAAAAGCACCATGAAGTGCTCTTTTGAGTAAAATATTCTTGTAATCTTCTCCATTTCTGCTTTGTCTTCATTAGTAAGTGGAGTGACGGGAATAACGAGGATGAAAAGATGAACTCCAGGATCACAGAGAGACACACAGTTGAGAGTCTCCCGCATCACTTCCTCCTCTGAGAGCTGAGTGAGAGCTGGAAGCTCTATTACAGTGATCTGACGTCCATCTATCTTGCCCTCTTTCTTCACACACTCTTTACACTCTTTCTCTAGCTCTTTCTGAGGTTTCCCTCTAAACATTTTAGACACTGAGGTCTTGAGTGTTGTATTATATCCACACAGCACAATGTTCAGCTTTGTTTTTCCAGAAGTAGTCACTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432113 lncRNA upstream 7075 59877 ~ 95290 (-) True G378081
TU432121 lncRNA upstream 37809 90611 ~ 94556 (-) True G378086
TU432092 lncRNA upstream 81270 142176 ~ 142213 (-) True G378068
CI01000185_00015550_00020227.mRNA mRNA downstream 15658 15126 ~ 20227 (-) True CI01000185_00015550_00020227
CI01000185_00004801_00013583.mRNA mRNA downstream 22302 4574 ~ 13583 (-) True CI01000185_00004801_00013583
CI01000185_00107906_00156757.mRNA mRNA upstream 54854 107656 ~ 157424 (-) False CI01000185_00107906_00156757
CI01000185_00193329_00212613.mRNA mRNA upstream 138891 191693 ~ 215393 (-) True CI01000185_00193329_00212613
TU432101 other upstream 94347 147149 ~ 169662 (-) True G378075

Expression Profile