RNA id: CI01000192_00116033_00116872.mRNA


Basic Information

Item Value
RNA id CI01000192_00116033_00116872.mRNA
length 404
RNA type mRNA
GC content 0.35
exon number 2
gene id CI01000192_00116033_00116872
representative True

Chromosome Information

Item Value
chromosome id CI01000192
NCBI id null
chromosome length 382550
location 115839 ~ 116872 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGATCCAAAGACTGAATCTCACACCAAGCAAGTGTCTAGGACAATACCCAACTTTAAGTCCTTCTTGTAACTTTCCTCATTGCCCTCTCAACATCTCAAATTCAAACCAAAAGCAACACAAACTGCAAAAGCCTCCTGACCAAAAGCACTTTCACTACACACTTCTAAAAACTTCTACTTGTCCTTCTACCTTTGTTATTCTGCCATAGTCCATTTTACTACATATTAATGTCTTTGAAAACGATTGTCAACAGTGTTTCAATCTGATATTTTAAGACAAAAACAGATCATTACATATTTGACATATTGATGAGGCAAATTCATTGAAGCTCTGAAAACATGATGTGCCAATATCGGCTCCTCTCTGAAGTTTTATTGCATGCAGTTAAGTCAATCTATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU439440 lncRNA downstream 44373 42296 ~ 71466 (-) True G384247
TU439485 lncRNA upstream 2846 119718 ~ 195455 (-) True G384283
TU439487 lncRNA upstream 4391 121263 ~ 221760 (-) True G384285
TU439477 lncRNA upstream 169380 286252 ~ 287782 (-) True G384279
TU439488 lncRNA upstream 195446 312318 ~ 314443 (-) True G384286
TU439533 lncRNA upstream 208603 325475 ~ 325699 (-) True G384329
CI01000192_00124135_00167418.mRNA mRNA upstream 6705 123577 ~ 167829 (-) True CI01000192_00124135_00167418
CI01000192_00169090_00206672.mRNA mRNA upstream 52097 168969 ~ 206672 (-) True CI01000192_00169090_00206672
CI01000192_00252038_00254509.mRNA mRNA upstream 133680 250552 ~ 254509 (-) True CI01000192_00252038_00254509
CI01000192_00315657_00323729.mRNA mRNA upstream 198701 315573 ~ 325189 (-) True CI01000192_00315657_00323729
CI01000192_00345708_00354498.mRNA mRNA upstream 228391 345263 ~ 356428 (-) False CI01000192_00345708_00354498
TU439471 other upstream 239257 356578 ~ 357426 (-) True G384276

Expression Profile