RNA id: CI01000192_00169090_00206672.mRNA


Basic Information

Item Value
RNA id CI01000192_00169090_00206672.mRNA
length 1309
RNA type mRNA
GC content 0.47
exon number 10
gene id CI01000192_00169090_00206672
representative True

Chromosome Information

Item Value
chromosome id CI01000192
NCBI id null
chromosome length 382550
location 168969 ~ 206672 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATATCGATGAGTGTGCCAGCGAATCTAATGGAGGATGCGTTCACGATTGTATCAACATCCCTGGAAACTACAGATGCACGTGCTACGATGGCTTCCGTTTGGCCCACGATGGACACAACTGCCTGGGACTTTATCCCACACAAACCATACAAACAGAAGTTTGTGGGTCTTGCCGTCATTGCTGGAACCAAACTTATAATGGTTGATGTTCTTCAGGCATGTCTAATCAAACTCTGCACTGACCGCCAGAACGCTGTCACTCTATCCTCCGTACTGCGTGAGCTCACGTTTTCAACATTCGGTGGCTCATATGCCCAGTCGTTTCCAGATGTTGACGAGTGCGCAGAAGGAAACGGCGGTTGCCAGCAGATCTGTGTCAACATGATGGGGAGTTACGAATGTCGATGCCGTGACGGATTTCTCCTGTCCGACAACCAGCACACCTGCATCCAGAGGCCCAAAGAGAAAGTCTCTCAGATGGACGCAGAGCAAGTGGAGAATAAACCTAGAGGAAATGAAGTCCCTTTAGTGCTTCAAGCTGTGCAGAAATGTCACAGGAAGTACTTTCTAATCAAACAAAACAACGTTCACTGGGTGAAGCTGCAGAATTGCGGTTCTGGGTGCCACGGGTCTGTTGACACAGATGCATCCTGGGGTCTGAAGTCAGTGGGGTGCTTTCATTCTCCTCTTACTGTTCAAACACTGATGAGCATGATTCTGATCTGGGTGCGTTTTAATGGAACTAAAGAAGCACCCACCTGCATGGATAAAAATCACGGCTGTGCCCACATTTGCAGAGAGACGCCTAAAGGAACCATCGCCTGTGAGTGCAGACCGGGATTTCAGCTCACCAAGAACAACCGAGACTGTAAACTGACGTGTAACTACGGTAACGGCGGCTGTCAGCACATCTGTGAGGAGATGGACCACGGGCCCAGATGTTCGTGTCACATGAAGTTTGCGCTTCACTCTGATGGGAAGACCTGTGTAGAGTTTGGCTTGATTTTATGCGGTGGAACCAAATCTCAGAGTTTCACTCAACATACAGTGAGAAATGGGCTCTTCTCTGCATCTCAAGTGTTTTACACTTTGCTTTGTATTACTGCAACCAATCACAGCAGACCTCTGATTCCTGAAGGACTAGCTATCCACAGCAGACTTACAGCTGTTTACGCCGAGCCTGATTAACGTCATTTAAAATCTCTGTGCCAGAACAAATAATTTTGTGTATTGTGTGTATTTGTGTATTTTTTTATTCAGAGAGTAGAACATTTTTTATGAAAAATTACCCCAAATCCCCCAAAATAAA

Function

GO:

id name namespace
GO:0048741 skeletal muscle fiber development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU439440 lncRNA downstream 97503 42296 ~ 71466 (-) True G384247
TU439477 lncRNA upstream 79580 286252 ~ 287782 (-) True G384279
TU439488 lncRNA upstream 105646 312318 ~ 314443 (-) True G384286
TU439533 lncRNA upstream 118803 325475 ~ 325699 (-) True G384329
TU439535 lncRNA upstream 119975 326647 ~ 326991 (-) True G384331
CI01000192_00124135_00167418.mRNA mRNA downstream 1140 123577 ~ 167829 (-) True CI01000192_00124135_00167418
CI01000192_00116033_00116872.mRNA mRNA downstream 52097 115839 ~ 116872 (-) True CI01000192_00116033_00116872
CI01000192_00252038_00254509.mRNA mRNA upstream 43880 250552 ~ 254509 (-) True CI01000192_00252038_00254509
CI01000192_00315657_00323729.mRNA mRNA upstream 108901 315573 ~ 325189 (-) True CI01000192_00315657_00323729
CI01000192_00345708_00354498.mRNA mRNA upstream 138591 345263 ~ 356428 (-) False CI01000192_00345708_00354498
TU439471 other upstream 149457 356578 ~ 357426 (-) True G384276

Expression Profile