RNA id: TU439471


Basic Information

Item Value
RNA id TU439471
length 443
RNA type TUCP
GC content 0.41
exon number 2
gene id G384276
representative True

Chromosome Information

Item Value
chromosome id CI01000192
NCBI id null
chromosome length 382550
location 356578 ~ 357426 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAACCGTTATTTACGCCAACGTTATTTACGCACACGTCAGTTTTCGGTGTTGTTTAGCGTTTAAATCGATAGTGAAAATGTCTAACTCAGTGATTTCAGTAATTTCCAGGTTTTTGGAGGAATATGCGTCCAGCACGCCGAATAAACTGAAAGTGGTAGACGCGTATCTTCTTTATATCATGATGACAGGGGCGCTGCAGTTTCTCTATTGTTTATTAGTCGGGACGTTTCCGTTCAACAGCTTTCTATCTGGTTTCATATCGTGCGTTGGATCGTTTATTCTCGCAGTGTGTCTGAGAATCCAGATTAATCCTCAGAATAAAGGCGAGTTCTTGTCCATCTCTCCAGAGAGAGCCTTTGCTGACTTCCTGTTCGCCCACACTGTACTTCATTTGGTTGTTATTAATTTCATTGGTTAAGTGTCCACGTGTGCTGATAAAAAGATAGATTGAGGAATGACCAAACCTGGAATGCGAATGCATCTTACAGGAAGCAGAGAAGAAAATTTATGTATTTTCTACCATCCGCTGACATGCAGCACCTGCAAACCTTATCAAATTTTCCAACACTGCATGTGACAAATCCCGAAACTGGCCAATGCTACTTGACAACTAAACAATATTTTGGG

Function

GO:

id name namespace
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU439535 lncRNA downstream 29138 326647 ~ 326991 (-) True G384331
TU439533 lncRNA downstream 30430 325475 ~ 325699 (-) True G384329
TU439488 lncRNA downstream 41686 312318 ~ 314443 (-) True G384286
TU439477 lncRNA downstream 68347 286252 ~ 287782 (-) True G384279
TU439487 lncRNA downstream 134369 121263 ~ 221760 (-) True G384285
CI01000192_00315657_00323729.mRNA mRNA downstream 30940 315573 ~ 325189 (-) True CI01000192_00315657_00323729
CI01000192_00252038_00254509.mRNA mRNA downstream 101620 250552 ~ 254509 (-) True CI01000192_00252038_00254509
CI01000192_00169090_00206672.mRNA mRNA downstream 149457 168969 ~ 206672 (-) True CI01000192_00169090_00206672
CI01000192_00124135_00167418.mRNA mRNA downstream 188300 123577 ~ 167829 (-) True CI01000192_00124135_00167418
CI01000192_00116033_00116872.mRNA mRNA downstream 239257 115839 ~ 116872 (-) True CI01000192_00116033_00116872

Expression Profile