RNA id: CI01000218_00189439_00192976.mRNA


Basic Information

Item Value
RNA id CI01000218_00189439_00192976.mRNA
length 2628
RNA type mRNA
GC content 0.38
exon number 10
gene id CI01000218_00189439_00192976
representative False

Chromosome Information

Item Value
chromosome id CI01000218
NCBI id null
chromosome length 266553
location 187984 ~ 193030 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGTTGTGCTGCAGTGTTAAAGTTCACAGCTGATTTAAACGTTTGAGTTGGCACAATGGGTTTGAGCGAGAATGCACAGACTGTGACTATGACGTCTCCCTATCAAGAACATCAGCCGCACAGGAATGGATCAGACACATGGAAGCTCAAGGATGAAGATGATGATGGCAAAGTTGTGGTTCAGGTCCACAGTAAATGGAACAACATCCGCGGCGCTCTATCATCTACCTGTGGGACAGGTCTGTATGCGTTCCTGCTGAGCGTGGCTCTGTTCTCGGCGCTGTGGTTCTGTGGCGTCCTGCGGGCCGGCACCATGACAGACAGGATCTTCTCTCTGGTCAGCGCTGGCATGGCCATCTCTCTGCTGCTCAGCCTGGCGTTGTACCTGTGTCCGATCCACACACACGCCTCTGCACAGGTGCACTACGACAACACAGCGGATCCTCTGCTGAAGTTTGCTCTGGGTCAGAATATGGATCCTCGTCTGGGCATCATCGACATCAAACACTTCGTCATGGTCAGGATCGGATTCATCGGCTGGGCCATGATGGATCTGAATTATCTGCTGACCGCGATAGAGATGCAGAACTCGCTGTCTCTCTCTCTGCTGCTAGTGATTGTCTTTCATCTCATTTACATACTGGACTTCCTCATCGATGAGGAATCTGTGCTGACGACCAAAGAGTTCACAGACGAGCCGATTGGCTTCATTATGATTTTGGGCGAGTTCATCTGGATCCCTTTCTTCTCCAGTCTTCCTGTTTACTTCCTTCTTCAGAGGCCCAATCACATCCATTTCCTGTCGGCCGTGCCCATCTGCCTGCTCTTCGGTATTGGCTTCCTGATTTATTACCTGTCCAACGAGCAGAAAGATGGCTTCCGCAGAAATCCAAATGACCCGGCCTACGCTTGTCTGCACACAATCCGAAGCCCGACAGGAAGACGTCTTCTGGTTTCTGGATGGTTCGGATGGGTTAGACACCCTAACTACCTAGGAGACATTCTGATGACGTTTGCCTGGTGTCTCCCCTGCGGGTTCACCAGCGTTCTGCCGTACTTGCCGACACTCCAGTGCTTTAACATATTAAGGCAACGAGCCAATGAGATCGAAGATTCATGTCTGAAGAAGCACGGCGACGCCTGGCGAGAATATTGCCGTCGTGTGCCGTACAAACTGGTGCCTTATGTGTACTGAAGATCTGAGATCTCTAATGTGGATTTTTTTGTACATAAACTTCTATCAAAGCATGGTTCTTTTGTTGAGTTATTATTCTTAGCTGTGTAAGTGATTTGAACACATAAATCGAGACCAAGCAATGTGACATTTGATTCCCACAAAAAGTATTACAGGGTGGATTCGCTGTATATAAAACAAAAAACTTCAAGGTTGTGCAAAAACAAGTAAGAACCACCTGATAACTCATTTATATTAACTTTGGTCCCACTTTATATTAGGTGTCTTCACTTTTTTCTAAATTATGACGATAATTATAAGATTAAAAAGTCAAATTTATACGATTTTTATACGTTCTGTCATAATTTTGACTTTTTATGTCTTAATTTCAACTTGTCATAATTGACTTTTTAATTTATATAATTCTGAAATGTTTGACATTTCAACTTGGTGTCATAAGTCAGAATTTAGTTTTTTGTCATAATTTTGACTTTTTAATGTCAATTTCAGCTTGTCATAACTGACCTTTTAATTCATAATTCCAAATTTTATGTCATTATTTCAAATTTTTGTCATTGACTTTTTAAGTCAGAATTGTTTTTTGTCATCGTTTCCAACTTTTTAATGTCATAATTTCAATTTATGACATAATTTACTTTTTAATGCATGAATCCGAATTTTGTCATAATTTTGACTTTTTGTTACTGACTTTTTTAGTCAATATAGTTTTTTGTCATAATTTTGACTTTAATGTCAATTTCAACTTGTCATAATTGACTTTTTAATACGTAATTCTGAATTTTGTCATTATTTCAACTCAGTCATAACTGTCATTGACTTTTTAAGTCAGAATTGTTTCATTTTGTTTTTATTTTTTGTCATTATTTTGAACTTTTCAATATCATAATTTCAATTTATGTCATAATTGACTTTTTAATGCATAATTCTGAATGTTATGTCATTATTTTGACTTAGTATGTAATCATTTTGACTTTTTTGTCATTGACTTTAGGCTATAAGTCATAATTTAGTTTTTTTGTCATCAATTCGACATTTTAATGTCTTAATTTCTATTTAGTGTCATAATTCCAACTTTTATATCACTTTTAAGTCATTTTTACTGAAAATATTACTGTGCTGTTGCATTTGAATCTCATTCTCAGCAATAATTTTACTGTTTTTTTTTTTTTTTTTTGGTTTTTTTTACTGCTTTTACAGTAGTACATTGACCAAAAAGATACAAGAATAGTGTGTTCAATGTGGTAAAAACTGATTTTGCTTTTAAAACTGTGCTTTTACACTATTATAAAGATAGAAAGACCGTCATAAAGAACAGAACCGTCGGTGTGTGATTAGTGTAATGAGGCGCGAGAGCCGCGGTGTATGATGGGAGACTATCAGCCATTTCACCTCAAACTCTCTTCAAGCAGCAAAATCCCTCGGCAGCGGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU450107 lncRNA downstream 20049 166130 ~ 166359 (-) True G393073
TU450137 lncRNA downstream 26639 159503 ~ 161366 (-) True G393102
TU450111 lncRNA upstream 10873 203903 ~ 205595 (-) False G393077
TU450112 lncRNA upstream 10873 203903 ~ 205595 (-) True G393077
CI01000218_00185345_00187069.mRNA mRNA downstream 516 184787 ~ 187489 (-) False CI01000218_00185345_00187069
CI01000218_00173197_00175957.mRNA mRNA downstream 11757 173127 ~ 176248 (-) True CI01000218_00173197_00175957
CI01000218_00167659_00171329.mRNA mRNA downstream 16676 167094 ~ 171329 (-) False CI01000218_00167659_00171329
CI01000218_00155323_00156947.mRNA mRNA downstream 31058 155196 ~ 156947 (-) True CI01000218_00155323_00156947
CI01000218_00119041_00133536.mRNA mRNA downstream 54469 119041 ~ 133536 (-) True CI01000218_00119041_00133536
CI01000218_00198649_00204828.mRNA mRNA upstream 5204 198234 ~ 204828 (-) False CI01000218_00198649_00204828
CI01000218_00214048_00223824.mRNA mRNA upstream 21018 214048 ~ 223824 (-) True CI01000218_00214048_00223824

Expression Profile