RNA id: TU450111


Basic Information

Item Value
RNA id TU450111
length 584
lncRNA type sense_over
GC content 0.49
exon number 2
gene id G393077
representative False

Chromosome Information

Item Value
chromosome id CI01000218
NCBI id null
chromosome length 266553
location 203903 ~ 205595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGAACCGCGGCGCTGACAGAGTTCAGCTGCATCAGGTGGACGGCGACACACTGCTGGTTTTGATTGACAACTCCGTTCACACAGTCGCTCTGGACGGATCAGCCAAAAGCCACAGACTCCTGCCGTCGGACGTCACCTTTAAGTTAGACATAGACGCCGTGGTGTATTACGACGACACGCTGATCGCCATCTGGAAACACGGCTGGCAGAGGAGAGGTCAGGGGTCATCAGAGATACTGCAGGAAATCACTGACACCAAAAGAATATTCCGGCTGCTGGGATCTGACAGAACCGTTGTCATGGAGAAGCGAGTGTGTGATGACCAATCAGGACTCTGTAATCTGTACATCCTGGAGACGGTTGACTCCGCCCCTGTTTCCTGAGAGTGTTACACAAACACGCACACACACAAACACACACACAGGACTGCCAAACTCTGTTACTAAATTCATTTTACATAAAACTCCCCCTGATGTTAATAAAGACGTCAATAAAAGTGTGAGAACACGCGTGTGTGCGTGTGTGTGTGTGAGAGAGAGCGAAGAGAGCGAGAGTATCTGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAGAGAGAGAAAAAGAGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGATAGAGAGAGAGAGAGAGAGCAGCGCCACCTCCTGGTCGGTCAGAAATCTCTTCAGTGTCTGTTTGCTGTTTTTCTGATGGGACATTCTGAACATCACAGAGATGTTTTTGGAGAAACTGGAGTATTTGCACGTCTGTTGTGGATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU450107 lncRNA downstream 35947 166130 ~ 166359 (-) True G393073
TU450137 lncRNA downstream 42537 159503 ~ 161366 (-) True G393102
CI01000218_00189439_00192976.mRNA mRNA downstream 10873 188005 ~ 193030 (-) False CI01000218_00189439_00192976
CI01000218_00185345_00187069.mRNA mRNA downstream 16414 184787 ~ 187489 (-) False CI01000218_00185345_00187069
CI01000218_00173197_00175957.mRNA mRNA downstream 27655 173127 ~ 176248 (-) True CI01000218_00173197_00175957
CI01000218_00167659_00171329.mRNA mRNA downstream 32574 167094 ~ 171329 (-) False CI01000218_00167659_00171329
CI01000218_00155323_00156947.mRNA mRNA downstream 46956 155196 ~ 156947 (-) True CI01000218_00155323_00156947
CI01000218_00214048_00223824.mRNA mRNA upstream 8453 214048 ~ 223824 (-) True CI01000218_00214048_00223824
TU450094 other downstream 15820 177176 ~ 178218 (-) True G393070

Expression Profile