RNA id: CI01000300_01730095_01731153.mRNA


Basic Information

Item Value
RNA id CI01000300_01730095_01731153.mRNA
length 421
RNA type mRNA
GC content 0.45
exon number 2
gene id CI01000300_01730095_01731153
representative True

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1730095 ~ 1731153 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGCAGTTCTTTCACGCGACTTCTACGTTCCTTATTATGGCTGTTCTCTGCAGTCTGCTATGGTCTTTAGCAGGGGGTACCTTGGTTGTGAAATACTCACGTGAACCGGTGACGGAGACTGAAGGCCATTCGTTGTCTCTCAAGTGTGAGGTGCAGTATGAGATACAGGATTGTGACATTGTGAACAATTGGTGGTACATAAAGCACGCTAAGCGTGAACCTGAGGTCGAGCCCATCACAGATCCAAACCAATATGTAATTGAAGTAAATGAAACACAAAAAGAAAAACTGAGGCACAGGAACATTTTCCTCTCATTCAATTCCTTGAGACTTAAAGACAGTGGATACTACCAGTGTGATGCCAAATGTCTCAACAGTGGGACTGCAGCGAAAGGCCATCTTGTGTACCTCAATGTCACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU470376 lncRNA downstream 97267 1632490 ~ 1632828 (-) True G409388
TU470422 lncRNA downstream 111011 1618850 ~ 1619084 (-) True G409424
TU470400 lncRNA downstream 115442 1563145 ~ 1614653 (-) True G409402
TU470409 lncRNA downstream 136785 1592979 ~ 1593310 (-) True G409411
TU470387 lncRNA downstream 178370 1551354 ~ 1551725 (-) True G409399
TU470456 lncRNA upstream 32232 1763385 ~ 1763621 (-) True G409454
TU470365 lncRNA upstream 40938 1772091 ~ 1784816 (-) False G409380
TU470366 lncRNA upstream 40938 1772091 ~ 1774588 (-) True G409380
TU470461 lncRNA upstream 47348 1778501 ~ 1780832 (-) True G409459
TU470516 lncRNA upstream 249577 1980730 ~ 1981204 (-) True G409513
CI01000300_01726202_01727298.mRNA mRNA downstream 2797 1726034 ~ 1727298 (-) True CI01000300_01726202_01727298
CI01000300_01634104_01696058.mRNA mRNA downstream 34037 1634104 ~ 1696058 (-) True CI01000300_01634104_01696058
CI01000300_01623190_01629652.mRNA mRNA downstream 99056 1622883 ~ 1631039 (-) True CI01000300_01623190_01629652
CI01000300_01537230_01547051.mRNA mRNA downstream 183044 1537176 ~ 1547051 (-) True CI01000300_01537230_01547051
CI01000300_01387744_01388660.mRNA mRNA downstream 340857 1387744 ~ 1389238 (-) True CI01000300_01387744_01388660
CI01000300_01733901_01736015.mRNA mRNA upstream 2507 1733660 ~ 1736022 (-) True CI01000300_01733901_01736015
CI01000300_01742156_01744802.mRNA mRNA upstream 11003 1742156 ~ 1744802 (-) True CI01000300_01742156_01744802
CI01000300_01812173_01822492.mRNA mRNA upstream 80993 1812146 ~ 1822492 (-) True CI01000300_01812173_01822492
CI01000300_01824226_01831566.mRNA mRNA upstream 92810 1823963 ~ 1831566 (-) True CI01000300_01824226_01831566
CI01000300_01844908_01942907.mRNA mRNA upstream 113145 1844298 ~ 1942907 (-) True CI01000300_01844908_01942907
TU469190 other downstream 1443208 279917 ~ 286887 (-) True G408318
TU470565 other upstream 556028 2287181 ~ 2288973 (-) True G409558
TU470823 other upstream 1132005 2863158 ~ 2863998 (-) True G409775
TU471599 other upstream 2069986 3801139 ~ 3808207 (-) True G410498
TU471625 other upstream 2345611 4080204 ~ 4082102 (-) True G410508
TU471627 other upstream 2345611 4076764 ~ 4080539 (-) True CI01000300_04075307_04079312

Expression Profile