Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019683 |
| length | 713 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 4 |
| gene id | XLOC_009863 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 21698980 ~ 21745336 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051568 | histone H3-K4 methylation | biological_process |
| GO:0048188 | Set1C/COMPASS complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0042393 | histone binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021922 | lncRNA | upstream | 64253 | 21634387 ~ 21634836 (+) | True | XLOC_009862 |
| TCONS_00021921 | lncRNA | upstream | 556573 | 21141048 ~ 21142516 (+) | True | XLOC_009859 |
| TCONS_00019662 | lncRNA | upstream | 811665 | 20871044 ~ 20887424 (+) | False | XLOC_009850 |
| TCONS_00019660 | lncRNA | upstream | 818884 | 20871015 ~ 20880205 (+) | False | XLOC_009850 |
| TCONS_00019690 | lncRNA | downstream | 97902 | 21801719 ~ 21802475 (+) | True | XLOC_009864 |
| TCONS_00021709 | lncRNA | downstream | 170578 | 21874395 ~ 21877421 (+) | True | XLOC_009866 |
| TCONS_00019695 | lncRNA | downstream | 318474 | 22022291 ~ 22097683 (+) | False | XLOC_009868 |
| TCONS_00019694 | lncRNA | downstream | 318716 | 22022533 ~ 22097384 (+) | False | XLOC_009868 |
| TCONS_00021923 | lncRNA | downstream | 318716 | 22022533 ~ 22113936 (+) | True | XLOC_009868 |
| TCONS_00019676 | mRNA | upstream | 257863 | 21425114 ~ 21441226 (+) | False | XLOC_009861 |
| TCONS_00019678 | mRNA | upstream | 258163 | 21426524 ~ 21440926 (+) | True | XLOC_009861 |
| TCONS_00019677 | mRNA | upstream | 269875 | 21425139 ~ 21429214 (+) | False | XLOC_009861 |
| TCONS_00019675 | mRNA | upstream | 280314 | 21330634 ~ 21418775 (+) | False | XLOC_009860 |
| TCONS_00019674 | mRNA | upstream | 280314 | 21330634 ~ 21418775 (+) | True | XLOC_009860 |
| TCONS_00019686 | mRNA | downstream | 34377 | 21738194 ~ 21745336 (+) | True | XLOC_009863 |
| TCONS_00019687 | mRNA | downstream | 85886 | 21789703 ~ 21804638 (+) | False | XLOC_009864 |
| TCONS_00019688 | mRNA | downstream | 87053 | 21790870 ~ 21804845 (+) | False | XLOC_009864 |
| TCONS_00019689 | mRNA | downstream | 97460 | 21801277 ~ 21805974 (+) | False | XLOC_009864 |
| TCONS_00019691 | mRNA | downstream | 163344 | 21867161 ~ 21867872 (+) | True | XLOC_009865 |
| TCONS_00019667 | other | upstream | 785605 | 20913413 ~ 20913484 (+) | True | XLOC_009854 |
| TCONS_00019658 | other | upstream | 1194224 | 20496773 ~ 20504865 (+) | True | XLOC_009846 |
| TCONS_00019655 | other | upstream | 1394814 | 20296823 ~ 20304275 (+) | True | XLOC_009845 |
| TCONS_00019651 | other | upstream | 1528261 | 20167834 ~ 20170828 (+) | True | XLOC_009843 |
| TCONS_00019642 | other | upstream | 1994551 | 19704424 ~ 19704538 (+) | True | XLOC_009838 |
| TCONS_00019718 | other | downstream | 1693984 | 23397801 ~ 23399160 (+) | False | XLOC_009882 |
| TCONS_00019728 | other | downstream | 1903414 | 23607231 ~ 23607352 (+) | True | XLOC_009889 |
| TCONS_00019735 | other | downstream | 2134103 | 23837920 ~ 23854611 (+) | False | XLOC_009892 |
| TCONS_00019751 | other | downstream | 2257054 | 23960871 ~ 23962929 (+) | False | XLOC_009898 |
| TCONS_00019767 | other | downstream | 2812275 | 24516092 ~ 24517092 (+) | False | XLOC_009904 |
