Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019958 |
| length | 1645 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | XLOC_010036 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 31802203 ~ 31813018 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0045165 | cell fate commitment | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0045839 | negative regulation of mitotic nuclear division | biological_process |
| GO:0007088 | regulation of mitotic nuclear division | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005102 | signaling receptor binding | molecular_function |
| GO:0005109 | frizzled binding | molecular_function |
| GO:0005125 | cytokine activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-000411-1 | Predicted to enable cytokine activity and frizzled binding activity. Acts upstream of or within negative regulation of mitotic nuclear division. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blastomere and nervous system. |
| ensembl_id | ENSDART00000167321 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021726 | lncRNA | upstream | 669159 | 31121756 ~ 31135431 (+) | True | XLOC_010031 |
| TCONS_00021725 | lncRNA | upstream | 676506 | 31121756 ~ 31128084 (+) | False | XLOC_010031 |
| TCONS_00021968 | lncRNA | upstream | 710010 | 31090998 ~ 31094580 (+) | True | XLOC_010030 |
| TCONS_00021966 | lncRNA | upstream | 1473709 | 30329863 ~ 30330881 (+) | False | XLOC_010024 |
| TCONS_00021969 | lncRNA | downstream | 148019 | 31960908 ~ 31985059 (+) | False | XLOC_010041 |
| TCONS_00019972 | lncRNA | downstream | 148027 | 31960916 ~ 31970381 (+) | True | XLOC_010041 |
| TCONS_00021970 | lncRNA | downstream | 279823 | 32092712 ~ 32095588 (+) | False | XLOC_010047 |
| TCONS_00019987 | lncRNA | downstream | 454230 | 32267119 ~ 32270270 (+) | True | XLOC_010051 |
| TCONS_00021971 | lncRNA | downstream | 466110 | 32278999 ~ 32314568 (+) | False | XLOC_010052 |
| TCONS_00019954 | mRNA | upstream | 256790 | 31542645 ~ 31547800 (+) | True | XLOC_010034 |
| TCONS_00019953 | mRNA | upstream | 287363 | 31511739 ~ 31517227 (+) | True | XLOC_010033 |
| TCONS_00019952 | mRNA | upstream | 402436 | 31396647 ~ 31402154 (+) | True | XLOC_010032 |
| TCONS_00019949 | mRNA | upstream | 838010 | 30959423 ~ 30966580 (+) | False | XLOC_010028 |
| TCONS_00019959 | mRNA | downstream | 14613 | 31827502 ~ 31836739 (+) | False | XLOC_010037 |
| TCONS_00019960 | mRNA | downstream | 14764 | 31827653 ~ 31837482 (+) | False | XLOC_010037 |
| TCONS_00019962 | mRNA | downstream | 41030 | 31853919 ~ 31868985 (+) | True | XLOC_010038 |
| TCONS_00019964 | mRNA | downstream | 108923 | 31921812 ~ 31927522 (+) | False | XLOC_010039 |
| TCONS_00019963 | mRNA | downstream | 108923 | 31921812 ~ 31927522 (+) | False | XLOC_010039 |
| TCONS_00019955 | other | upstream | 169995 | 31634470 ~ 31634595 (+) | True | XLOC_010035 |
| TCONS_00019951 | other | upstream | 833433 | 30970501 ~ 30971157 (+) | True | XLOC_010029 |
| TCONS_00019939 | other | upstream | 1723929 | 30080543 ~ 30080661 (+) | True | XLOC_010021 |
| TCONS_00019938 | other | upstream | 1767897 | 30002752 ~ 30036693 (+) | False | XLOC_010020 |
| TCONS_00019912 | other | upstream | 2588230 | 29216274 ~ 29216360 (+) | True | XLOC_010005 |
| TCONS_00019961 | other | downstream | 16149 | 31829038 ~ 31836487 (+) | True | XLOC_010037 |
| TCONS_00019968 | other | downstream | 109898 | 31922787 ~ 31923924 (+) | True | XLOC_010039 |
| TCONS_00019985 | other | downstream | 379308 | 32192197 ~ 32196767 (+) | True | XLOC_010050 |
| TCONS_00019992 | other | downstream | 859931 | 32672820 ~ 32672936 (+) | True | XLOC_010055 |
| TCONS_00020010 | other | downstream | 1530262 | 33343151 ~ 33343265 (+) | True | XLOC_010067 |
