Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019959 |
| length | 1563 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 8 |
| gene id | XLOC_010037 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 31827502 ~ 31837482 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050913-67 | Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in cytoplasm and nucleus. Orthologous to human MLF2 (myeloid leukemia factor 2). |
| ensembl_id | ENSDART00000045210 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021726 | lncRNA | upstream | 692071 | 31121756 ~ 31135431 (+) | True | XLOC_010031 |
| TCONS_00021725 | lncRNA | upstream | 699418 | 31121756 ~ 31128084 (+) | False | XLOC_010031 |
| TCONS_00021968 | lncRNA | upstream | 732922 | 31090998 ~ 31094580 (+) | True | XLOC_010030 |
| TCONS_00021966 | lncRNA | upstream | 1496621 | 30329863 ~ 30330881 (+) | False | XLOC_010024 |
| TCONS_00021969 | lncRNA | downstream | 124169 | 31960908 ~ 31985059 (+) | False | XLOC_010041 |
| TCONS_00019972 | lncRNA | downstream | 124177 | 31960916 ~ 31970381 (+) | True | XLOC_010041 |
| TCONS_00021970 | lncRNA | downstream | 255973 | 32092712 ~ 32095588 (+) | False | XLOC_010047 |
| TCONS_00019987 | lncRNA | downstream | 430380 | 32267119 ~ 32270270 (+) | True | XLOC_010051 |
| TCONS_00021971 | lncRNA | downstream | 442260 | 32278999 ~ 32314568 (+) | False | XLOC_010052 |
| TCONS_00019957 | mRNA | upstream | 14484 | 31802203 ~ 31813018 (+) | False | XLOC_010036 |
| TCONS_00019956 | mRNA | upstream | 14487 | 31802203 ~ 31813015 (+) | False | XLOC_010036 |
| TCONS_00019958 | mRNA | upstream | 14613 | 31804590 ~ 31812889 (+) | True | XLOC_010036 |
| TCONS_00019954 | mRNA | upstream | 279702 | 31542645 ~ 31547800 (+) | True | XLOC_010034 |
| TCONS_00019953 | mRNA | upstream | 310275 | 31511739 ~ 31517227 (+) | True | XLOC_010033 |
| TCONS_00019962 | mRNA | downstream | 17180 | 31853919 ~ 31868985 (+) | True | XLOC_010038 |
| TCONS_00019964 | mRNA | downstream | 85073 | 31921812 ~ 31927522 (+) | False | XLOC_010039 |
| TCONS_00019963 | mRNA | downstream | 85073 | 31921812 ~ 31927522 (+) | False | XLOC_010039 |
| TCONS_00019965 | mRNA | downstream | 85326 | 31922065 ~ 31923503 (+) | False | XLOC_010039 |
| TCONS_00019966 | mRNA | downstream | 85417 | 31922156 ~ 31923503 (+) | False | XLOC_010039 |
| TCONS_00019955 | other | upstream | 192907 | 31634470 ~ 31634595 (+) | True | XLOC_010035 |
| TCONS_00019951 | other | upstream | 856345 | 30970501 ~ 30971157 (+) | True | XLOC_010029 |
| TCONS_00019939 | other | upstream | 1746841 | 30080543 ~ 30080661 (+) | True | XLOC_010021 |
| TCONS_00019938 | other | upstream | 1790809 | 30002752 ~ 30036693 (+) | False | XLOC_010020 |
| TCONS_00019912 | other | upstream | 2611142 | 29216274 ~ 29216360 (+) | True | XLOC_010005 |
| TCONS_00019968 | other | downstream | 86048 | 31922787 ~ 31923924 (+) | True | XLOC_010039 |
| TCONS_00019985 | other | downstream | 355458 | 32192197 ~ 32196767 (+) | True | XLOC_010050 |
| TCONS_00019992 | other | downstream | 836081 | 32672820 ~ 32672936 (+) | True | XLOC_010055 |
| TCONS_00020010 | other | downstream | 1506412 | 33343151 ~ 33343265 (+) | True | XLOC_010067 |
| TCONS_00020013 | other | downstream | 1883230 | 33719969 ~ 33733378 (+) | True | XLOC_010069 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | TU163221 | True | 1240 | lncRNA | 0.46 | 7 | CI01000027 | 9220947 ~ 9225381 (-) |
