RNA id: TCONS_00019993


Basic Information

Item Value
RNA id TCONS_00019993
length 826
RNA type mRNA
GC content 0.41
exon number 4
gene id XLOC_010056
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 32729223 ~ 32734765 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTACGCATGCGTAGAAGAGCAGTGTAGGTAGCCGCAATCCTGCTACGCAACTGGCAATCAGTCCCATTGCGATTTCGccaatatttatatacataacaAGAAAAAGGGAGCGTAGTTATCGAGCAGCTTTACATACTGCGAGTACTAGCATGGCGTTAAATGTTTGTTCGAGGCTGACGAGAAATGTTGTCCGTGTTTTAGCTAACAGAAGTGCGATTCCTGTCACAAGACCACTGACAAGAAGTTCATGGACACATTTACGTTACTTACACAATATCAGCATCATTCGTTATGATAGTGTTTCATTACGAAATTTCAGTTCTTCAAGTCAGCCCTCAGTAGATGTGTCCTATGAGCAGCTTAAAAAACTGCTGGTGTCTGGATCCAGTGTTGTTATTGATGTCCGTGAACCCTGGGAACTTAGGGAATATGGGAACATACAGGGGTCAATCAACGTCCCATTAGGACAGGTAAACGGAGCTCTACAGCTCACACCTGATGAGTTCAAGGAGAAATATGGAGGAGATATGCCATCGAAATCCCAAAATATAGTCTTCAGTTGTCTTGCTGGTGTAAGAAGCAAACATGCCCTGGAAGCAGCAGTGTCTTTAGGATACACCAAGGTTCAACATTTTCCAGGCGGATGGCAAGAATGGGCTGAACGTGAATTGATACAAACCAAAAAATAATTGCCACACTGTAGCCATGTTAACACTGTGATAGAAGTTTAATTGATTTAAACAATCTGAAAAGCATCAAAGACATTCAGTTAAAATGTGCCACTGAAACTCAATAAACGAACGTAATTGACTGGAAATAAAAAGAA

Function

GO:

id name namespace
GO:0004792 thiosulfate sulfurtransferase activity molecular_function
GO:0016740 transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-224 Predicted to enable thiosulfate sulfurtransferase activity. Orthologous to human TSTD3 (thiosulfate sulfurtransferase like domain containing 3).

Ensembl:

ensembl_id ENSDART00000125663

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019990 lncRNA upstream 219765 32397507 ~ 32509458 (+) True XLOC_010053
TCONS_00019989 lncRNA upstream 363652 32304854 ~ 32365571 (+) False XLOC_010052
TCONS_00021971 lncRNA upstream 414655 32278999 ~ 32314568 (+) False XLOC_010052
TCONS_00021973 lncRNA downstream 324134 33058899 ~ 33063159 (+) True XLOC_010060
TCONS_00021974 lncRNA downstream 445341 33180106 ~ 33214537 (+) True XLOC_010065
TCONS_00021727 lncRNA downstream 515725 33250490 ~ 33255253 (+) False XLOC_010066
TCONS_00020008 lncRNA downstream 519535 33254300 ~ 33293780 (+) False XLOC_010066
TCONS_00020009 lncRNA downstream 520314 33255079 ~ 33288208 (+) False XLOC_010066
TCONS_00019991 mRNA upstream 166131 32559821 ~ 32563092 (+) True XLOC_010054
TCONS_00019986 mRNA upstream 453193 32238020 ~ 32276030 (+) False XLOC_010051
TCONS_00019984 mRNA upstream 532452 32184485 ~ 32196771 (+) False XLOC_010050
TCONS_00019983 mRNA upstream 570190 32152612 ~ 32159033 (+) True XLOC_010049
TCONS_00019981 mRNA upstream 582041 32131568 ~ 32147182 (+) False XLOC_010048
TCONS_00019994 mRNA downstream 1823 32736588 ~ 32743653 (+) False XLOC_010057
TCONS_00019995 mRNA downstream 1833 32736598 ~ 32744258 (+) True XLOC_010057
TCONS_00019996 mRNA downstream 14826 32749591 ~ 32755900 (+) True XLOC_010058
TCONS_00019997 mRNA downstream 261117 32995882 ~ 33004852 (+) True XLOC_010059
TCONS_00019998 mRNA downstream 374731 33109496 ~ 33119626 (+) False XLOC_010061
TCONS_00019992 other upstream 56287 32672820 ~ 32672936 (+) True XLOC_010055
TCONS_00019985 other upstream 532456 32192197 ~ 32196767 (+) True XLOC_010050
TCONS_00019968 other upstream 805299 31922787 ~ 31923924 (+) True XLOC_010039
TCONS_00019961 other upstream 892736 31829038 ~ 31836487 (+) True XLOC_010037
TCONS_00019955 other upstream 1094628 31634470 ~ 31634595 (+) True XLOC_010035
TCONS_00020010 other downstream 608386 33343151 ~ 33343265 (+) True XLOC_010067
TCONS_00020013 other downstream 985204 33719969 ~ 33733378 (+) True XLOC_010069
TCONS_00020014 other downstream 1017337 33752102 ~ 33756379 (+) False XLOC_010070
TCONS_00020038 other downstream 1989803 34724568 ~ 34724682 (+) True XLOC_010085
TCONS_00020039 other downstream 2472090 35206855 ~ 35280788 (+) True XLOC_010087

Expression Profile

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