Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019999 |
| length | 1379 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | XLOC_010061 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 33109496 ~ 33119626 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007189 | adenylate cyclase-activating G protein-coupled receptor signaling pathway | biological_process |
| GO:0019222 | regulation of metabolic process | biological_process |
| GO:0038171 | cannabinoid signaling pathway | biological_process |
| GO:0060218 | hematopoietic stem cell differentiation | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0035701 | hematopoietic stem cell migration | biological_process |
| GO:0097241 | hematopoietic stem cell migration to bone marrow | biological_process |
| GO:0006555 | methionine metabolic process | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004949 | cannabinoid receptor activity | molecular_function |
| id | description |
|---|---|
| ko04080 | Neuroactive ligand-receptor interaction |
| ko04030 | G protein-coupled receptors |
| id | description |
|---|---|
| ZDB-GENE-040702-7 | Predicted to enable cannabinoid receptor activity. Acts upstream of or within several processes, including hematopoietic stem cell differentiation; hematopoietic stem cell migration to bone marrow; and methionine metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including digestive system; gill; heart; hematopoietic system; and nervous system. Used to study anxiety disorder. Orthologous to human CNR2 (cannabinoid receptor 2). |
| ensembl_id | ENSDART00000058473 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021973 | lncRNA | upstream | 48788 | 33058899 ~ 33063159 (+) | True | XLOC_010060 |
| TCONS_00019990 | lncRNA | upstream | 602489 | 32397507 ~ 32509458 (+) | True | XLOC_010053 |
| TCONS_00019989 | lncRNA | upstream | 746376 | 32304854 ~ 32365571 (+) | False | XLOC_010052 |
| TCONS_00021974 | lncRNA | downstream | 64872 | 33180106 ~ 33214537 (+) | True | XLOC_010065 |
| TCONS_00021727 | lncRNA | downstream | 135256 | 33250490 ~ 33255253 (+) | False | XLOC_010066 |
| TCONS_00020008 | lncRNA | downstream | 139066 | 33254300 ~ 33293780 (+) | False | XLOC_010066 |
| TCONS_00020009 | lncRNA | downstream | 139845 | 33255079 ~ 33288208 (+) | False | XLOC_010066 |
| TCONS_00021728 | lncRNA | downstream | 176185 | 33291419 ~ 33293780 (+) | True | XLOC_010066 |
| TCONS_00019997 | mRNA | upstream | 107095 | 32995882 ~ 33004852 (+) | True | XLOC_010059 |
| TCONS_00019996 | mRNA | upstream | 356047 | 32749591 ~ 32755900 (+) | True | XLOC_010058 |
| TCONS_00019995 | mRNA | upstream | 367689 | 32736598 ~ 32744258 (+) | True | XLOC_010057 |
| TCONS_00019994 | mRNA | upstream | 368294 | 32736588 ~ 32743653 (+) | False | XLOC_010057 |
| TCONS_00019993 | mRNA | upstream | 377182 | 32729223 ~ 32734765 (+) | True | XLOC_010056 |
| TCONS_00020000 | mRNA | downstream | 5872 | 33121106 ~ 33141934 (+) | False | XLOC_010062 |
| TCONS_00020001 | mRNA | downstream | 6026 | 33121260 ~ 33140580 (+) | True | XLOC_010062 |
| TCONS_00020002 | mRNA | downstream | 27500 | 33142734 ~ 33152582 (+) | False | XLOC_010063 |
| TCONS_00020003 | mRNA | downstream | 28269 | 33143503 ~ 33149234 (+) | False | XLOC_010063 |
| TCONS_00020004 | mRNA | downstream | 28396 | 33143630 ~ 33151289 (+) | False | XLOC_010063 |
| TCONS_00019992 | other | upstream | 439011 | 32672820 ~ 32672936 (+) | True | XLOC_010055 |
| TCONS_00019985 | other | upstream | 915180 | 32192197 ~ 32196767 (+) | True | XLOC_010050 |
| TCONS_00019968 | other | upstream | 1188023 | 31922787 ~ 31923924 (+) | True | XLOC_010039 |
| TCONS_00019961 | other | upstream | 1275460 | 31829038 ~ 31836487 (+) | True | XLOC_010037 |
| TCONS_00019955 | other | upstream | 1477352 | 31634470 ~ 31634595 (+) | True | XLOC_010035 |
| TCONS_00020010 | other | downstream | 227917 | 33343151 ~ 33343265 (+) | True | XLOC_010067 |
| TCONS_00020013 | other | downstream | 604735 | 33719969 ~ 33733378 (+) | True | XLOC_010069 |
| TCONS_00020014 | other | downstream | 636868 | 33752102 ~ 33756379 (+) | False | XLOC_010070 |
| TCONS_00020038 | other | downstream | 1609334 | 34724568 ~ 34724682 (+) | True | XLOC_010085 |
| TCONS_00020039 | other | downstream | 2091621 | 35206855 ~ 35280788 (+) | True | XLOC_010087 |
