Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00020124 |
| length | 1502 |
| lncRNA type | antisense_over |
| GC content | 0.51 |
| exon number | 4 |
| gene id | XLOC_010145 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 39857185 ~ 39901940 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006892 | post-Golgi vesicle-mediated transport | biological_process |
| GO:0033036 | macromolecule localization | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0012505 | endomembrane system | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022000 | lncRNA | upstream | 226604 | 39631610 ~ 39632068 (+) | True | XLOC_010144 |
| TCONS_00021999 | lncRNA | upstream | 230476 | 39627713 ~ 39628196 (+) | True | XLOC_010143 |
| TCONS_00021998 | lncRNA | upstream | 231302 | 39624124 ~ 39627370 (+) | True | XLOC_010142 |
| TCONS_00021739 | lncRNA | upstream | 1124730 | 38731787 ~ 38733942 (+) | True | XLOC_010134 |
| TCONS_00020095 | lncRNA | upstream | 1606572 | 38240045 ~ 38252100 (+) | True | XLOC_010127 |
| TCONS_00022002 | lncRNA | downstream | 50417 | 39952357 ~ 39964699 (+) | False | XLOC_010146 |
| TCONS_00022003 | lncRNA | downstream | 60464 | 39962404 ~ 39966375 (+) | True | XLOC_010146 |
| TCONS_00021741 | lncRNA | downstream | 70229 | 39972169 ~ 39977388 (+) | True | XLOC_010147 |
| TCONS_00020130 | lncRNA | downstream | 141769 | 40043709 ~ 40049273 (+) | False | XLOC_010150 |
| TCONS_00020131 | lncRNA | downstream | 141855 | 40043795 ~ 40052553 (+) | True | XLOC_010150 |
| TCONS_00020123 | mRNA | upstream | 275004 | 39485608 ~ 39583668 (+) | True | XLOC_010141 |
| TCONS_00020121 | mRNA | upstream | 472599 | 39271123 ~ 39386073 (+) | False | XLOC_010140 |
| TCONS_00020122 | mRNA | upstream | 476104 | 39271250 ~ 39382568 (+) | True | XLOC_010140 |
| TCONS_00020120 | mRNA | upstream | 612593 | 39242339 ~ 39246079 (+) | True | XLOC_010139 |
| TCONS_00020119 | mRNA | upstream | 625221 | 39196727 ~ 39233451 (+) | True | XLOC_010138 |
| TCONS_00020127 | mRNA | downstream | 122943 | 40024883 ~ 40031779 (+) | True | XLOC_010149 |
| TCONS_00020128 | mRNA | downstream | 141733 | 40043673 ~ 40074145 (+) | False | XLOC_010150 |
| TCONS_00020129 | mRNA | downstream | 141767 | 40043707 ~ 40074142 (+) | False | XLOC_010150 |
| TCONS_00020134 | mRNA | downstream | 229586 | 40131526 ~ 40314090 (+) | False | XLOC_010153 |
| TCONS_00020137 | mRNA | downstream | 315103 | 40217043 ~ 40220920 (+) | True | XLOC_010155 |
| TCONS_00020117 | other | upstream | 700490 | 39147002 ~ 39158182 (+) | False | XLOC_010137 |
| TCONS_00020107 | other | upstream | 1461877 | 38394413 ~ 38396795 (+) | True | XLOC_010132 |
| TCONS_00020102 | other | upstream | 1506394 | 38350723 ~ 38352278 (+) | False | XLOC_010130 |
| TCONS_00020097 | other | upstream | 1559028 | 38296001 ~ 38299644 (+) | True | XLOC_010128 |
| TCONS_00020086 | other | upstream | 1837538 | 38021019 ~ 38021134 (+) | True | XLOC_010122 |
| TCONS_00020126 | other | downstream | 109929 | 40011869 ~ 40011991 (+) | True | XLOC_010148 |
| TCONS_00020136 | other | downstream | 281803 | 40183743 ~ 40183859 (+) | True | XLOC_010154 |
| TCONS_00020139 | other | downstream | 400851 | 40302791 ~ 40320230 (+) | True | XLOC_010153 |
| TCONS_00020142 | other | downstream | 444507 | 40346447 ~ 40347376 (+) | False | XLOC_010157 |
| TCONS_00020144 | other | downstream | 444655 | 40346595 ~ 40348954 (+) | True | XLOC_010157 |
