Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00022012 |
| length | 1197 |
| lncRNA type | antisense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | XLOC_010184 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 42090306 ~ 42096260 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0034447 | very-low-density lipoprotein particle clearance | biological_process |
| GO:0006739 | NADP metabolic process | biological_process |
| GO:0044281 | small molecule metabolic process | biological_process |
| GO:0034381 | plasma lipoprotein particle clearance | biological_process |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00020182 | lncRNA | upstream | 16601 | 42066582 ~ 42073705 (+) | True | XLOC_010183 |
| TCONS_00020174 | lncRNA | upstream | 201009 | 41873834 ~ 41889297 (+) | False | XLOC_010180 |
| TCONS_00022011 | lncRNA | upstream | 251233 | 41837291 ~ 41839073 (+) | True | XLOC_010179 |
| TCONS_00020164 | lncRNA | upstream | 616988 | 41465511 ~ 41473318 (+) | True | XLOC_010173 |
| TCONS_00021747 | lncRNA | upstream | 942143 | 41142659 ~ 41148163 (+) | True | XLOC_010170 |
| TCONS_00021748 | lncRNA | downstream | 240985 | 42337245 ~ 42337549 (+) | True | XLOC_010186 |
| TCONS_00020184 | lncRNA | downstream | 367749 | 42464009 ~ 42470146 (+) | False | XLOC_010187 |
| TCONS_00022013 | lncRNA | downstream | 367962 | 42464222 ~ 42470146 (+) | False | XLOC_010187 |
| TCONS_00022014 | lncRNA | downstream | 424446 | 42520706 ~ 42521936 (+) | True | XLOC_010191 |
| TCONS_00022015 | lncRNA | downstream | 594799 | 42691059 ~ 42693663 (+) | True | XLOC_010193 |
| TCONS_00020179 | mRNA | upstream | 43425 | 42018041 ~ 42046881 (+) | False | XLOC_010182 |
| TCONS_00020181 | mRNA | upstream | 43425 | 42018367 ~ 42046881 (+) | True | XLOC_010182 |
| TCONS_00020180 | mRNA | upstream | 43426 | 42018042 ~ 42046880 (+) | False | XLOC_010182 |
| TCONS_00020178 | mRNA | upstream | 106173 | 41974438 ~ 41984133 (+) | True | XLOC_010181 |
| TCONS_00020177 | mRNA | upstream | 201098 | 41874001 ~ 41889208 (+) | True | XLOC_010180 |
| TCONS_00020183 | mRNA | downstream | 174239 | 42270499 ~ 42308680 (+) | True | XLOC_010185 |
| TCONS_00020185 | mRNA | downstream | 368353 | 42464613 ~ 42470146 (+) | False | XLOC_010187 |
| TCONS_00020186 | mRNA | downstream | 369258 | 42465518 ~ 42470156 (+) | True | XLOC_010187 |
| TCONS_00020187 | mRNA | downstream | 375195 | 42471455 ~ 42472987 (+) | True | XLOC_010188 |
| TCONS_00020188 | mRNA | downstream | 380895 | 42477155 ~ 42477952 (+) | True | XLOC_010189 |
| TCONS_00020166 | other | upstream | 541869 | 41546763 ~ 41548437 (+) | True | XLOC_010175 |
| TCONS_00020157 | other | upstream | 1036074 | 41042310 ~ 41054232 (+) | False | XLOC_010166 |
| TCONS_00020150 | other | upstream | 1504530 | 40576679 ~ 40585776 (+) | False | XLOC_010161 |
| TCONS_00020144 | other | upstream | 1741352 | 40346595 ~ 40348954 (+) | True | XLOC_010157 |
| TCONS_00020142 | other | upstream | 1742930 | 40346447 ~ 40347376 (+) | False | XLOC_010157 |
| TCONS_00020194 | other | downstream | 676452 | 42772712 ~ 42781394 (+) | False | XLOC_010194 |
| TCONS_00020198 | other | downstream | 780186 | 42876446 ~ 42878011 (+) | True | XLOC_010197 |
| TCONS_00020200 | other | downstream | 802169 | 42898429 ~ 42898510 (+) | False | XLOC_010198 |
| TCONS_00020214 | other | downstream | 2509066 | 44605326 ~ 44605440 (+) | True | XLOC_010211 |
| TCONS_00020216 | other | downstream | 2586805 | 44683065 ~ 44687935 (+) | True | XLOC_010212 |
