RNA id: TU538126


Basic Information

Item Value
RNA id TU538126
length 433
lncRNA type antisense_over
GC content 0.33
exon number 2
gene id G468850
representative True

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10472733 ~ 10473902 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTAAAAAGGAAATCACAGATTTAATAAAACAAATGCTGATGAACAAATGCCATTTTATTCAATATTAACAGAACTCACAGAAAAAGAAATTAAGTCAATATATAACAAGACTTCAGGAAAACTATTGAACACTGTTGAACGGAAATTAAAAAAAAAAAAAAAATCATTACACTTAAAGGGGTAAAGTGAAAAGGAGATGGGTGCAAGGTGGGAAAAACAACAACAGAAATAGAACAAGTATGATGACTATTTCGGTGGGTCTGTGTTTATCCCGTACTTCTCTTTGAGAAGCTTCAGCTGCTCCTCCTTTTTCTTTGTGTCCATTTTTTGGAAAGCCCTGTTTGCATTATAGTACAATACAACTAAGTATCTGTTGCAGACGTTGAATCCAGAAAGGTGATCACAGGCATTTTTGGCATCAAAGATATCTTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU538156 lncRNA downstream 3248 10435268 ~ 10469485 (-) False G468876
TU538158 lncRNA downstream 3248 10438024 ~ 10469485 (-) True G468876
TU538168 lncRNA downstream 9056 10460586 ~ 10463677 (-) True G468885
TU538138 lncRNA downstream 34884 10415135 ~ 10437849 (-) True G468861
TU537987 lncRNA downstream 84581 10386043 ~ 10388152 (-) True G468718
TU538194 lncRNA upstream 28367 10502269 ~ 10506615 (-) True G468905
CI01000325_10330659_10345549.mRNA mRNA downstream 127184 10330659 ~ 10345549 (-) True CI01000325_10330659_10345549
CI01000325_10259809_10261986.mRNA mRNA downstream 210747 10259473 ~ 10261986 (-) True CI01000325_10259809_10261986
CI01000325_10223671_10247196.mRNA mRNA downstream 225201 10222845 ~ 10247532 (-) True CI01000325_10223671_10247196
CI01000325_10200118_10220665.mRNA mRNA downstream 251482 10199979 ~ 10221251 (-) True CI01000325_10200118_10220665
CI01000325_10092490_10094515.mRNA mRNA downstream 378218 10092414 ~ 10094515 (-) True CI01000325_10092490_10094515
CI01000325_10486953_10491074.mRNA mRNA upstream 12374 10486276 ~ 10491074 (-) True CI01000325_10486953_10491074
TU538097 other downstream 156048 10316130 ~ 10316685 (-) True G468823
TU537962 other downstream 280391 10167099 ~ 10192342 (-) True G468702
TU537690 other downstream 1185409 9287209 ~ 9287324 (-) True G468455
TU536859 other downstream 1775150 8679172 ~ 8697583 (-) True G467741
TU536851 other downstream 1901255 8564630 ~ 8568433 (-) True G467737

Expression Profile