Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000340_07701724_07717637.mRNA |
| length | 3100 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 18 |
| gene id | CI01000340_07701724_07717637 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7701386 ~ 7717852 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K20092 | CHD1L; chromodomain-helicase-DNA-binding protein 1-like |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU562571 | lncRNA | upstream | 26117 | 7675055 ~ 7675269 (+) | True | G490417 |
| TU562429 | lncRNA | upstream | 29026 | 7671424 ~ 7672360 (+) | True | G490289 |
| TU562552 | lncRNA | upstream | 68413 | 7632754 ~ 7632973 (+) | True | G490401 |
| TU562550 | lncRNA | upstream | 80912 | 7620226 ~ 7620474 (+) | True | G490399 |
| TU562549 | lncRNA | upstream | 82748 | 7618416 ~ 7618638 (+) | True | G490398 |
| TU562607 | lncRNA | downstream | 14166 | 7732018 ~ 7732811 (+) | True | G490448 |
| TU562641 | lncRNA | downstream | 25528 | 7743380 ~ 7743594 (+) | True | G490482 |
| TU562625 | lncRNA | downstream | 29818 | 7747670 ~ 7823029 (+) | True | G490466 |
| TU562614 | lncRNA | downstream | 141424 | 7859276 ~ 7871160 (+) | True | G490455 |
| TU562626 | lncRNA | downstream | 203011 | 7920863 ~ 7923790 (+) | True | CI01000340_07920331_07924545 |
| CI01000340_07698442_07700739.mRNA | mRNA | upstream | 647 | 7698442 ~ 7700739 (+) | True | CI01000340_07698442_07700739 |
| CI01000340_07692812_07697115.mRNA | mRNA | upstream | 4053 | 7692812 ~ 7697333 (+) | True | CI01000340_07692812_07697115 |
| CI01000340_07641488_07649078.mRNA | mRNA | upstream | 51892 | 7641146 ~ 7649494 (+) | True | CI01000340_07641488_07649078 |
| CI01000340_07486593_07487826.mRNA | mRNA | upstream | 213560 | 7486477 ~ 7487826 (+) | True | CI01000340_07486593_07487826 |
| CI01000340_07482030_07483694.mRNA | mRNA | upstream | 217484 | 7482030 ~ 7483902 (+) | True | CI01000340_07482030_07483694 |
| CI01000340_07721395_07728614.mRNA | mRNA | downstream | 3543 | 7721395 ~ 7728752 (+) | True | CI01000340_07721395_07728614 |
| CI01000340_07752737_07754368.mRNA | mRNA | downstream | 34885 | 7752737 ~ 7755297 (+) | True | CI01000340_07752737_07754368 |
| CI01000340_07794457_07834047.mRNA | mRNA | downstream | 75916 | 7793768 ~ 7835726 (+) | True | CI01000340_07794457_07834047 |
| CI01000340_07920331_07924545.mRNA | mRNA | downstream | 202479 | 7920331 ~ 7924545 (+) | False | CI01000340_07920331_07924545 |
| CI01000340_07929169_07934135.mRNA | mRNA | downstream | 210630 | 7928482 ~ 7934419 (+) | True | CI01000340_07929169_07934135 |
| TU561697 | other | upstream | 1000598 | 6694221 ~ 6700788 (+) | False | G489634 |
| TU559265 | other | upstream | 3036201 | 4664309 ~ 4665185 (+) | True | CI01000340_04660938_04668996 |
| TU559057 | other | upstream | 3299890 | 4399419 ~ 4401496 (+) | True | CI01000340_04399692_04401164 |
| TU558935 | other | upstream | 3718841 | 3973915 ~ 3982545 (+) | True | G487133 |
| TU558577 | other | upstream | 4769586 | 2930091 ~ 2931800 (+) | True | G486806 |
| TU562819 | other | downstream | 1320960 | 9038812 ~ 9043101 (+) | True | G490645 |
| TU563018 | other | downstream | 1407332 | 9125184 ~ 9131397 (+) | True | G490826 |
| TU563038 | other | downstream | 1517121 | 9234973 ~ 9237559 (+) | True | G490839 |
| TU563102 | other | downstream | 2113621 | 9831473 ~ 9845052 (+) | True | G490896 |
| TU564577 | other | downstream | 2933831 | 10651683 ~ 10652694 (+) | True | G492194 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00062857 | True | 4437 | mRNA | 0.46 | 25 | NC_007117.7 | 36844127 ~ 36877587 (+) |
