RNA id: TCONS_00020524


Basic Information

Item Value
RNA id TCONS_00020524
length 5586
RNA type mRNA
GC content 0.42
exon number 17
gene id XLOC_010449
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8364085 ~ 8520474 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCTTTAGATACTGACAGCGTCCAGCgcgcacacacagtcacacacatacacatttacagTGAATAAGACACCGTTCATCTCCGCTAAAGAGAGACGCTTTTCCTCATCTATCTGAGGTGGATGTGATATCCGAGAGAGACACTAACAGAACGTGTATCATGGCTGTGGCCGGATGTCCGGATTATTTTCTACACCATCCAAATTACAAGGATAATGTAGATCGAGCTGCCAATCACAGACAAGCAGACCTGATTGGACCAAGTTTTCAGCAGTCAGCCAGTCACAATTCACCCAGCCATCAAGAGGATGACGTGGATCTGGAGGCtctggtgaatgacatgaactCTTCTTTGGAGAGTCTGTACACATCATGCAGTGTGCAATCCGAGTCCACTCCTCTTCTGCACAACGGCCAGCCACACCGACCCTCCGCCTACCACACACACGCTCAGCCAATCTCCCCACACCAGAGACTGCGGCGGTCCCAGCCCATGAACATCCTCGCTGTCAGAAGACTTCAGGAAGAGGCACAACAGTACCGGACGTCTTCACTGCCTGCCATCCCAAACCCCTTCCCGGAGCTCTGCAGTCCTGCCAGTTCCCCAACGCTCAGCTCTGGCTCCTTACCTCAGTGTCAGCCCTCAGACAAATATATTATAAAAATATTCAGCGAGGACGGGATGGGAAAGGTGGTGGAGATCCCAGCCGACATGACGGCGCGAGACCTGTGCCAGTTTCTCGTCTATAAAAACCATTGTGTGGACGATAACAGTTGGGCGCTTGTGGAGCATCATCCAGCCCTGGGACTCGAGAGATGTTTAGAAGACCATGAACTGGTTGTCCAAGTGCAGACGTCAATGATCAGCGAGAGTAAATTTCTCTTCAGGAAGAACTATGCCAAATATGAATTCTTTAAAAATCCTTTGAACTTCTTCCCTGAGCAAATGATTGCCTGGTGTCAGGAGACCAATGGGACCATCCCCCCATCTCAGCTCTTGCAgAACTTCTTGAACTCCAGCAGTTGTCCTGAGATCCAGGGATATTTGTATGTGAAAGAGATGGGCAGGAAATCGTGGAAGaaactgtatgtgtttttaagacGGTCAGGGTTGTATTTTTCGACGAAAGGAACGTCAAAGGAGCCCAGGCATTTACAGCTACTAGCAGACCTGGAGGACAGCAATGTCTTTACAGTGATAACAGGGAGAAAGCTGCACAGTGCACCGACTGACTTTGAATTCTGCATAAAACCGAACAAAGTAAGGAATGAAGTGAAGGAACTAAGGATGTTGTGTGCAGAGGACGAACAGAGCAGAACATGCTGGATGACAGCCTTCAGACTCTTTAAGTATGGAATTTTACTCTATCAAAATTACAAGATCCACCAGCAGAGAAAAACGTTGCTTTCACACTTCTCAGCGCCTGTGAGGAGTGTTTCAGAGAGCTCTCTGGTTGCCATGGATTTCTCAGGGAGGATAGGCAGAGTGATCGACAATCCTGTGGAGGCACAGAGTGCTGCCATGGAGGAGGGACATGCCTGGAGAaagaaaagcCAGCAGCGTATGAATATTTTAGGAAGCCCCAGTTCTTTACACCCCTCATCATTAAGCGGAGTTATCCACAGAACTCAGCTGTGGTTTCACGGTCGTATTTCACGGGAAGAATCCCACAAGCTGATCCATCAGCAGGGCAGAGTGGATGGAATGTTTCTCCTGAGGGACAGCCAGAGCAATCCTAAGGCGTTTGTACTTACACTGTGTCACCACCAGaaaatcaaacattttcaaatattGCTGTGTGAAGAAGATGGTCAAATGTTCTTGAGTCTCGATGACGGCGCCGTCAAATTCACAGACCTAATCCAGTTGGTGGAGTTTTACACGCTCAACAGAGGAGTTCTGCCTTGCAAACTGAAACACCCCTGCACCACTGTGGCCTTATGACCTCCATATGCCTGATTTCGCCTAAAGACAAACATTCAGACGACGTGTGCTGTGGTGTAATGCTGTGCTGCTTGGCTGGAGAAAAGCACACTTTGAGAGCAAGtcaaggagaaagagagagagggaaaaaaaattgaTACACAAACAGGGCCGGCAAGAATTAAGGAAATTAAGCTTGTGTGTTAGATGAACCTCTCAGCCACCCGCACACTCAACCGTGGCCAGGGCAGGTTCTCAGGACAATCATCCAGAGGAAGCCTTCAGGATCCGCCTTCAGGTCTTAATCGTGCAGATGTGATAGTGGTTTGGAAATGGCCAGCAAAACACTTATCAATCAcgtttgattttattttgcacTCATGAACCAGGAACAACCAAGCTATAACAATTgttactttcaaaaaaaaaaaaaagtcaagcagATTCTAGAATGTGGACAACAGATTGGTGGTTTCAGTACTGTGAAAAGACACTGCCGACCGTTGAATTTTTCGCTTTCTGTCACTTTCATCCATAATTCAATTATTTAGATGTAcacttgctttctttttttaaaatgctcGTCGTTTTGAGCACAAAACTCTCATGTTTTGGGTCTTGTTTAGTTTCTGCTTTATCACAAAGCATAGCCTGCAGCGCTCTCTGCTGGCCATACCCAGACATGACACGTCACTCCTTCAAGGAATAGTTTACCTCAAAAATAAAACTGGGTTATTTTAGCTATTTACGAGGTTGCACCAGAACCACATAATCTTTGTTTTGTAGAACACAGGAGACATATGTATTTGACATCCAAAAATGCTGTATTTCAAGTCCGTTTTATTGAAACCTTACAGTCAACCCTACtataaaaaacagcttaaaccagcctggttttataggggttttggccatttccaggctggtttccagccatttccagcctggactaagctggtcaggctgggagaggaccagttaaaaccagcttgactagccttgccagactgggagtccagccaaaaccagctacatGTATGTCCAGCTCATATCAGGCTGGTCATGCTGCCCCCATAGCAAAAAATCTCTGGCCCATatctggcccacaccatcagcatttgcttgggccacatgccgcagtgaattacggaaCATGACTGAACCAAGTCTGGCTTCCGTACAAGAGGCAAAcatagaccatatctgggccaagactctgccaagttaataacccataactgggcctgaactgggccagatatgttggtgtgtcatgactgcaatgttttttataaacCTATGAAGCATTTCGCTTTACGGCTGTGCTTTTTCTTAAAGCGACCCGAttgatatataattatttttttattttttttatttttttactcaaaactaacttaaattatttaaaaagtgggtcaagatagaccaaacttacgtggcccacgtatacatttttaacatctgggccaaatactacatttgatatctggcccaagtcttgagtGCCGCCTGTAAGCTGGTGCCACCTTGGCCAATGTATGCCAGTGCCAGACAAATGCTTGCTTTGctagctttatgccaaatctggaccAGAATTATTGGCTACCTAAgtggttttagttggtcattttccagcctgaccagctaagaccaggctgaaaatggctggaaactagcctggaaatggccaaaacccctccaaaaccaggctggctgaccagctaaaaccagccaaccagcttaggctgatTCAGGCTGTTTTGTTCCGCAGGGAagaccattttattttagttCTAAAAGGTCTGAGTAAGGACTAAAGGCCTCATCACAACAAAGGGTGGTAATTATaaagataaatattaaaaaaagacttCAGAACACAGTTATAATGCTAAAGATGTACATAAATTATATCATCAAGAATGACTTTCAGAACTTCTAAAACAGTGATAGCAGTCAGAATTCATAAACAAAATTTAAAGGTCTCAAAGGTGTTCTCACATTGTGGAGAAGCACACCCTGCTTGATGTTAATCCCTCTTTTCAAAGATTATTTAAAGATAACGTCCATTTTGAAAACAACATGGGAGCAGTGTTAAATAGCATGGAGGCTATGCAAGCCAGGCTAGCAAATTgaagtataaaataaaagtacCCTAAATATCCATTGCTAAATTTTGCATCTTTGTTGCCACTTTTAAAAATcctgagaaaaaaatatacagtttattTTCCTGCGATTTCTAAACTCTTCGTTTAATTTGAACAGCACactgaggacatctgctggttaTTTGGCGGTAATGCAAAAAGAAAAGTTTAAGGCAAAAGTAAGCAGATCGCTCTTGTTTGCTTGGATGGACACAAATATAGTCATTTTGGTTCTACCTATATGTAGTTATCTTCCTTAGTGTGAACAGGCCTTAAGACCTAAAGAAGGTTGGATTCAAAAGAGTTGGAGACCATGAAAATTTAAGTTTAGAGTACTAAAAAAATGTGAtagctttgtttaaaaaatgtctaaCAAACACAGTTCACATTTACCCTCATTATAAAAAAGATGGTTTCAATGGTGATAATGAAGAACAACAaggatatacattttatttttgaggcAACTATTCCTTTAAACACGAGTGCAAGCAAAACATGGCCTGACATTCCCACCAGATCCTATAGGAACGGTGCCTTGAACAGAGGAGTCTGTTGAGTTCAGTGAAATAAAAACCACTAAACCCTCTGGGAACTCCGCTGTGGGTCGCAGTCTTTCAGGAGCTAGATCAACAAACTGGAATCTCTTTAACTGCTGTCATCTTCAGTCCCAGCTCCAGTCCATTTGGTTGTTGactttctatttttttctctctccatgtTTCGGAAGATTGTTTCAAGGACAGCACACTGTGAAGCCCGGGCTAAGAACACCCAAGGAACAATGGGGTTCGAATTTCTAATCTGCCTTGTCCATGGTAGCAGTAGGTACAATGgatttgtaaagattttttttttgtacttatgACACAATGTAAAGAAAGAGCCATGTTTAGTATTGTGTTCTGCTAGATTGAGAGGGCATAGCCACCATGTCTACAAGTTCACCCAAGAGACCAGTACATAGATAAATGCAAATGACGCAATCGATAATAAGCATTGCttcaacaaatttatttatttatctggatTTGATTACTTGAAATTTAGTttcgtttttagtttttttttttttttctcagcgcTGTTGATACTATTGttccacatttttttgtgaatttttttggACCTCAGTTAACAAGACCCCCgttctaaaacattttaagactaaTTTTCATCAATATCCTAGTGTAGAATCACAGTCTTCATGGACCTTATTTGTGGTAGACATGTAGTGCACTCTCTTCAATGGATTTTAATCTTACATTAATTGCTGTCAGCtcataatacaattttatataaacacctgaagaaaaaaaagaaaatccagttAACATTGTGACTTATTAAACCAGTGGCGTAGCAAGTCAGTGACcggatacattttttaaaaatatttgacgGGACATTTAAAACATATCAAACTATACAATTAAAATACACTCTACCCAACAACTTTTTTACAAGCAGACTGGGActtcatatttcatatatttatatatatatatat

Function

GO:

id name namespace
GO:0030178 negative regulation of Wnt signaling pathway biological_process
GO:0046627 negative regulation of insulin receptor signaling pathway biological_process
GO:0008286 insulin receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005158 insulin receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091020-12 Predicted to enable insulin receptor binding activity. Predicted to be involved in insulin receptor signaling pathway; negative regulation of Wnt signaling pathway; and negative regulation of insulin receptor signaling pathway. Predicted to act upstream of or within signal transduction. Orthologous to human GRB10 (growth factor receptor bound protein 10).

Ensembl:

ensembl_id ENSDART00000137365

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020523 lncRNA downstream 60906 8300824 ~ 8303179 (-) True XLOC_010448
TCONS_00021785 lncRNA downstream 221773 8140712 ~ 8142312 (-) True XLOC_010444
TCONS_00020515 lncRNA downstream 379184 7968221 ~ 7984901 (-) True XLOC_010442
TCONS_00021784 lncRNA downstream 380302 7968024 ~ 7983783 (-) False XLOC_010442
TCONS_00020514 lncRNA downstream 390148 7968020 ~ 7973937 (-) False XLOC_010442
TCONS_00022115 lncRNA upstream 31315 8551789 ~ 8565101 (-) True XLOC_010451
TCONS_00022116 lncRNA upstream 148507 8668981 ~ 8679462 (-) True XLOC_010452
TCONS_00020539 lncRNA upstream 920547 9441021 ~ 9442003 (-) False XLOC_010457
TCONS_00020541 lncRNA upstream 1044029 9564503 ~ 9566371 (-) True XLOC_010458
TCONS_00022117 lncRNA upstream 1238702 9759176 ~ 9761753 (-) True XLOC_010461
TCONS_00020522 mRNA downstream 21336 8298542 ~ 8342749 (-) False XLOC_010448
TCONS_00020520 mRNA downstream 83200 8258203 ~ 8280885 (-) True XLOC_010446
TCONS_00020519 mRNA downstream 112100 8188188 ~ 8251985 (-) True XLOC_010445
TCONS_00020518 mRNA downstream 146590 8188188 ~ 8217495 (-) False XLOC_010445
TCONS_00020517 mRNA downstream 231343 8051261 ~ 8132742 (-) True XLOC_010443
TCONS_00020529 mRNA upstream 9298 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020528 mRNA upstream 9298 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020527 mRNA upstream 9298 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020530 mRNA upstream 10157 8530631 ~ 8663493 (-) False XLOC_010451
TCONS_00020531 mRNA upstream 11884 8532358 ~ 8613499 (-) False XLOC_010451
TCONS_00020521 other downstream 75638 8287771 ~ 8288447 (-) True XLOC_010447
TCONS_00020507 other downstream 667869 7694794 ~ 7696216 (-) True XLOC_010438
TCONS_00020506 other downstream 667874 7693881 ~ 7696211 (-) False XLOC_010438
TCONS_00020500 other downstream 1135806 7219992 ~ 7228279 (-) True XLOC_010432
TCONS_00020493 other downstream 1534450 6828552 ~ 6829635 (-) True XLOC_010430
TCONS_00020535 other upstream 781605 9302079 ~ 9302194 (-) True XLOC_010455
TCONS_00020559 other upstream 1734733 10255207 ~ 10261625 (-) True XLOC_010469
TCONS_00020565 other upstream 2309335 10829809 ~ 10837232 (-) False XLOC_010476
TCONS_00020567 other upstream 2395816 10916290 ~ 10916404 (-) True XLOC_010478
TCONS_00020572 other upstream 3240445 11760919 ~ 11779472 (-) False XLOC_010484

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000016_11034620_11091604.mRNA True 1632 mRNA 0.48 14 CI01000016 11034620 ~ 11091604 (-)
bowfin (Amia calva) AMCG00002547 True 5506 mRNA 0.39 13 CM030136.1 18586078 ~ 18602108 (-)