RNA id: TCONS_00001633


Basic Information

Item Value
RNA id TCONS_00001633
length 765
RNA type mRNA
GC content 0.41
exon number 2
gene id XLOC_001027
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 9626277 ~ 9629724 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAGACTGTACTTGTAGTTTGGTGACTTACACTCCATGCAAATAAGGTTTACCTGCTATATTTTCAAATCTAAGAAATGATGGATACTATGAACCAGCAGGGTCTTTGCCTAATCACATTAGCCATCTTGCTGGCATCTCTCCCAGTTGTTCAGAGCAAGAAGATTCTTGTCTTTTCTGTGGATGGCAGTCACTGGGTCAACATGAACATCTTGGTTGAAGCTCTTCATGCCAAAGGTCACAATATTACAGTCATGCGGATGACAAATAGCTGGTACATCAAAGAGTTCTCACCTCACTACACTTCAATCACTCTAAAGTCTGCAGGAGGATTTGATGAAGACTTCTTCACAGTCTACTGTGAAACTACTGGGTATTCTGAGGGAAGGTTCGATCTGGACTCATCTGAAGGTGAAGATAGAGATGTGGCAAAGTTTTTCAGGAATGGttgaagttgaaaacaaaatgatagTCAACATGTTTGAAGACCATCAGCAGATGTAGTCCTTAAAATATGCCAAATTTGATATGATTCTAACAGATCCGTTTATAGTCGCAGGGGTGCTCTTTTGGGTCACCATCTTAAACTTCCTATTGTCTACAATGCTCGCTGGACAGTTTACTTTGAAGCTCATTTTGCAATAGCTCCTTCTCCACTTTCTTATGTTCCTGTGCCACTGCTGGAGTTATCAGATCGCATGAGTTTCTTGGAAAGAGTGAGAAATTTTGTGATGTACATCATACCAGAAATACAGGCAGCTATCATG

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-160628-4 Predicted to enable UDP-glycosyltransferase activity.

Ensembl:

ensembl_id ENSDART00000164079

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00003340 lncRNA downstream 204965 9420824 ~ 9422275 (-) True XLOC_001024
TCONS_00001627 lncRNA downstream 305309 9314508 ~ 9321931 (-) True XLOC_001023
TCONS_00001626 lncRNA downstream 312445 9308271 ~ 9314795 (-) False XLOC_001023
TCONS_00001614 lncRNA downstream 464603 9157310 ~ 9162637 (-) True XLOC_001016
TCONS_00003339 lncRNA downstream 488080 9138638 ~ 9139160 (-) True XLOC_001015
TCONS_00003341 lncRNA upstream 286652 9916376 ~ 9918812 (-) True XLOC_001031
TCONS_00001651 lncRNA upstream 342972 9972696 ~ 9980810 (-) False XLOC_001033
TCONS_00001652 lncRNA upstream 349570 9979294 ~ 9980810 (-) True XLOC_001033
TCONS_00001676 lncRNA upstream 1042128 10671852 ~ 10682149 (-) True XLOC_001044
TCONS_00003342 lncRNA upstream 1109441 10739165 ~ 10740441 (-) True XLOC_001045
TCONS_00001631 mRNA downstream 100040 9499645 ~ 9527200 (-) True XLOC_001026
TCONS_00001628 mRNA downstream 141026 9459760 ~ 9486214 (-) False XLOC_001025
TCONS_00001630 mRNA downstream 141301 9469910 ~ 9485939 (-) True XLOC_001025
TCONS_00001625 mRNA downstream 349203 9273208 ~ 9278037 (-) True XLOC_001022
TCONS_00001624 mRNA downstream 349254 9270015 ~ 9277986 (-) False XLOC_001022
TCONS_00001635 mRNA upstream 1272 9630996 ~ 9652696 (-) False XLOC_001028
TCONS_00001636 mRNA upstream 1640 9631364 ~ 9641845 (-) False XLOC_001028
TCONS_00001637 mRNA upstream 1640 9631364 ~ 9652547 (-) False XLOC_001028
TCONS_00001638 mRNA upstream 1654 9631378 ~ 9652547 (-) False XLOC_001028
TCONS_00001639 mRNA upstream 6254 9635978 ~ 9652725 (-) False XLOC_001028
TCONS_00001629 other downstream 141160 9460010 ~ 9486080 (-) False XLOC_001025
TCONS_00001617 other downstream 429274 9197859 ~ 9197966 (-) True XLOC_001018
TCONS_00001610 other downstream 508569 9118100 ~ 9118671 (-) False XLOC_001012
TCONS_00001595 other downstream 974585 8650109 ~ 8652655 (-) False XLOC_001004
TCONS_00001587 other downstream 1073942 8552750 ~ 8553298 (-) True XLOC_000999
TCONS_00001646 other upstream 111078 9740802 ~ 9816875 (-) True XLOC_001029
TCONS_00001656 other upstream 433777 10063501 ~ 10064568 (-) False XLOC_001036
TCONS_00001657 other upstream 434150 10063874 ~ 10068533 (-) False XLOC_001036
TCONS_00001660 other upstream 436507 10066231 ~ 10071422 (-) False XLOC_001036
TCONS_00001661 other upstream 437155 10066879 ~ 10071431 (-) True XLOC_001036

Expression Profile

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