RNA id: CI01000365_00436141_00445601.mRNA


Basic Information

Item Value
RNA id CI01000365_00436141_00445601.mRNA
length 3211
RNA type mRNA
GC content 0.43
exon number 6
gene id CI01000365_00436141_00445601
representative True

Chromosome Information

Item Value
chromosome id CI01000365
NCBI id null
chromosome length 458031
location 435438 ~ 445601 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGAATGATGAACTACAAAGAGTTAAAGACCAGCACAAAACCAGCATGAAGAACAAGTATGAGAGATTATTTGAGGGGCTGAAACTCCAGGATAATGAAACACTGCTGAACAGGATCTACACACAGCTCTACATCATAGAGGGAGAGAGTGAAGGAGTGAATGAAGAACATGAGGTTTTACAGATGGAGAAAACAGCCAGAACACAGCACTCACAATACACTCCAATCTACTGCAATGACATCTTTAAAGCCTCACTTGAACCAGGATGTGAGGAGAAAGACCAAATCAAGACTGTTCTTACTAAAGGCATCGCTGGATTCGGAAAAACCGTCTCTGTGCAGAAGTTCATTCTGGACTGGGCTGAGGGAAAAGACAATCAGGATGTAGATTTCATGTTTGTGCTTCCATTTCGAGAGCTGAACTTGATCCGAGATCATCGGTACAGTCTTCACAGACTTCTGCTGGACTTTCATCCTGAACTTCAAGATCTGGACTCAAAGATTTATGAGGAGTGTAAAGTTGTGTTCATCTTTGATGGTCTGGATGAAAGCAGAATCACACTGATGTTTTCAGATGCTCATAAAGTGATTTCTGATGTGACTGAGACTTCATCAGTGGGTGTGTTGATGTCAAAGCTAATGAAAGGAGAGCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCAAATCAGATCCCATACAAATACATCAACCGTCTGACAGAAATTCAGGGATTCAATGAGCCCCAGAAGGAGGAATATTTCAGGAAGAGAATCAGTGACGAACATCAAGCCAGCAGGATCATCTCACACATCAGAAAAGCAAGAAGCCTCTACATCATGTGCCACATACCCATCTTCTGCTGGATTTCATCCACTGTGATTCTAAAGCTCCTGGAAGAAGATCTGAGTGCAGAAATCCCTCAAACTCTGACTGAAATGTACATCCACTTCCTGCTGATTCAGATCAACATGAGGAATCAGAAGTATGAAGAGAGAGATCCAGAGAAACTCCTGCAATCCAACAGAGAAGTGATTGTGAAACTTGCTGAAGTGGCTTTCAAACAGCTGATGAAGGGCAATTTGATGTTCTATGAGGAGGACCTGAGAGAGAGTGGCATAGATGTCACTGATGCCTCAGTGTATTCTGGGATTTGCACTGAGATCTTTAAGGAGGAATATGTAATTCTTCAGAGCAAAGTCTACAGCTTCATTCATCTGAGCGTTCAGGAGTTTCTCGCTGCTTTCTATGTGTTTTACTGCTATTTAACAAAGAAAATGGAGTCACATCAGTTTTTTCTGTATGAAGTCAGATGTTACAGGTTTGAAGACCCTCTGTTTGACCTACTAGCATCAGCAGTAGTTAAAGCCCTTGAGAGTGAGAATGGACATCTAGATCTGTTTCTGCGGTTCTTGTTGGGCATCTCACTGGAGTCCAGTCAGAGACTCTTACAGGATCTACTGACACACACAGAGAACAGCTCAGAGAGCATCAAGAGAACCACAAAGTACATTAAAGAGAAGCTCAAGGATGGACATGGACTCTCCACTGAAAGATCCATCAATCTGTTCCTCTGTCTATTGGAAGTGAAAGATCAGACTCTGTCCAGAGAGATTCAGGAGTTTGTGAAATCAGACAAACGCTCAGAGAAGAAACTCTCTTCTGCTCACTGCTCAACAATCGCCTACATGCTTCAGATGTCGGAGGAGGTGCTGGATGAGCTGGACCTCAAGAAATACAACACAACAGATGAGGGTAAAAGAAGACTGTGTTGTGAGAATTTGTCATCAGTTCTTCAATCCTCGAATTTTGTCCTGAGAGAGCTGGACCTGAGTAACAATAACATACAGGATTCAGGAGTGAAGCTGCTCTCTGATGGACTGAAGAGTCCAAACTGTCAGCTGCAGATACTAAGTTTGTCGATCTGTAATCTCACTGTTCATTGCTGTGAGAGTTTGTTGTCAGCTCTTCAGTCCTCGAACTGTGTACTGAGAGAGCTGGACCTGAGTAACAATGACCTTCAGTATTCAGGAGTGAAGCTGCTCTCTGATGGACTAAAGATCCCAAACTGTCAGCTGCAGATACTAAGTCTGTCTGGGTGTAATCTCACTTGTCAGTGTTGTGAGAGTTTGTCTTTAGCTCTACAATCCTCAAACTGTGTACTGAGACAGCTGGACCTGAGTAACAATGACCTGCAGGATTCAGGAGTGAAGCTGCTTTCTGATGGACTGAAGAGCCCAAACTGTCAGCTGCAGATATTGAGGTTGTCTGGCTGTATGGTGACAGAGGAAGGCTGTGGTTATGTGTCTTCAGCTCTGAGTTCAAACCCCTCACATCTGAGAGAGCTGGATTTGAGTTACAATCACCCAGGAGATTCAGGATTCAAACTTCTCTCTGACAAACTGAAGGATCCAAACTGCTCACTGCAGCTACTCAATGGTAGTGATCAGGTGGTGCTTAAAACATTTGGTGATGATGTTATCTATGGAGTCTAGGAATGCTGGTGCTCACAAGGCTTTAGGCCGTTTTATGTAAATTAGGTCTGTTTGATGGGGTCCATTTTCTCAATTGTTTCACTTCTGGGTGTAAGGCCAAAATTGACTACCCATTGAATGCCTATGAAACTACAGTACTTCAGGGACACACCAAGCCGATGGTTGGGCAATATAAGGTGATGCTGACAGAAACATTTATCTCATCGTTTTTTTCCATTTGGCTTCAACCTTGTCCGCTGTACCACATACCACAGATAGCAAAAATCACCTGGCCCAGACGCATCGTAAGTTCTGAGCCAGATCCGCTCAGTGGACTTGGGCCACGGTCTTTTGGCACAACAGGCCAGTACCGGCACAGATCTGTTTTTGCTCATCTGGACCAGATGCGGATTCCTTTAAGGTGATTTGGCCCAAATGTGGATCTGCCAGATCTGGGCCAGCTCATTTTGTATACACACACACACACACACACACAAAGTAGTATACATATTTAAAATTTAAATATCTTATTGTCTTTATGGCATTATTTTTTTCTGTTTTCACATGAAGCTATTAGAAAACAAAGGTGAAAATACTGATTTAGGTGTATATACATTCACTTCATTGAAAATGTTTTTACACTAAAATACCACCTGATAATCTAGTGTTTGTGCTAACTCAGCAGCCACTACTTCACTGTCTGTAAACATACATTAAAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU597256 lncRNA downstream 17102 416749 ~ 418336 (-) True G520573
TU597245 lncRNA downstream 25353 405701 ~ 410085 (-) True G520569
TU597239 lncRNA downstream 37330 394529 ~ 398108 (-) True G520565
TU597047 lncRNA downstream 110692 242506 ~ 324746 (-) True G520420
TU597045 lncRNA downstream 142538 291733 ~ 292900 (-) True G520418
CI01000365_00326334_00327173.mRNA mRNA downstream 107838 326075 ~ 327600 (-) True CI01000365_00326334_00327173
CI01000365_00215623_00216039.mRNA mRNA downstream 217049 214868 ~ 218389 (-) True CI01000365_00215623_00216039
CI01000365_00102657_00113817.mRNA mRNA downstream 321446 102430 ~ 113992 (-) True CI01000365_00102657_00113817
CI01000365_00096865_00101128.mRNA mRNA downstream 333254 96541 ~ 102184 (-) True CI01000365_00096865_00101128
CI01000365_00040221_00045449.mRNA mRNA downstream 389989 39830 ~ 45449 (-) True CI01000365_00040221_00045449
TU597227 other downstream 57780 376165 ~ 377658 (-) True G520557

Expression Profile