RNA id: TU597239


Basic Information

Item Value
RNA id TU597239
length 207
lncRNA type intronic
GC content 0.27
exon number 2
gene id G520565
representative True

Chromosome Information

Item Value
chromosome id CI01000365
NCBI id null
chromosome length 458031
location 394529 ~ 398108 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AACTGTTTCAACATTGATAATAATCATAAATGTTTCTTGATCATCAAATCATCATATCAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATTACACTTTACTATATATTCACATAGAAAACAGCTGATTTACATTGTAATAATATTTCATAATATTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU597047 lncRNA downstream 69783 242506 ~ 324746 (-) True G520420
TU597045 lncRNA downstream 101629 291733 ~ 292900 (-) True G520418
TU597120 lncRNA downstream 102878 280805 ~ 291651 (-) False G520491
TU597124 lncRNA downstream 104001 289764 ~ 290528 (-) True G520491
TU597121 lncRNA downstream 107556 273825 ~ 286973 (-) False G520491
TU597245 lncRNA upstream 7593 405701 ~ 410085 (-) True G520569
TU597256 lncRNA upstream 18641 416749 ~ 418336 (-) True G520573
CI01000365_00326334_00327173.mRNA mRNA downstream 66929 326075 ~ 327600 (-) True CI01000365_00326334_00327173
CI01000365_00215623_00216039.mRNA mRNA downstream 176140 214868 ~ 218389 (-) True CI01000365_00215623_00216039
CI01000365_00102657_00113817.mRNA mRNA downstream 280537 102430 ~ 113992 (-) True CI01000365_00102657_00113817
CI01000365_00096865_00101128.mRNA mRNA downstream 292345 96541 ~ 102184 (-) True CI01000365_00096865_00101128
CI01000365_00040221_00045449.mRNA mRNA downstream 349080 39830 ~ 45449 (-) True CI01000365_00040221_00045449
CI01000365_00436141_00445601.mRNA mRNA upstream 37330 435438 ~ 445601 (-) True CI01000365_00436141_00445601
TU597227 other downstream 16871 376165 ~ 377658 (-) True G520557

Expression Profile