RNA id: TU597256


Basic Information

Item Value
RNA id TU597256
length 838
lncRNA type antisense_over
GC content 0.54
exon number 7
gene id G520573
representative True

Chromosome Information

Item Value
chromosome id CI01000365
NCBI id null
chromosome length 458031
location 416749 ~ 418336 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGTTCAGGAGACTGCTGACCTCCACTGGAGACAACGACTCCATCAGCTCTGGCACACGGGCGGGTGGCATCAGGGTCAGGAAGGTGGTCAGATTCGGGAACTGGAAACTCATGAAGGATGACGTCAGGAAAGCGTAGTAGCTCTGGTTACCATAGCAGCGCAGCGGGGTGGGGCCTGCGAGAGAGCCGAGGATCTGCTGATAGATCTGATCTTGCGTTGCAGGCTGGAAGGTGGAGCTGGACGAGTTCAGCAGCTGCACCGCCTGCTGGCTGATGGGACAGGGTCGCTGCTGGACGACGCTGAAGTAAGTCGTCACGTGTTGGACTGTAATGTTGGTTATGAACGGAGGCAGTATGTTCAGGATCCAGGTCTTCAGATTATCATCTGATAACGTGGTCAGATTGGCCCGGTCAAATACCTGCTGCAGAAACGTGTCCTGCACTGGAGGAGGGAGAACGACGCCCTGCATCTGTAGCGACACAGAGAGAGATGTGTAGAAAGTCGTAAACTGTGCGTCCGGCACGTTGAGCAGCAGATGATCGACCGCGGCGGCGCTGGACAGGACTCCAGGAGTGCTGGAAACCTCCACTAACTGTTTCAGGCTCAGCAGACTCAGAATGTCCAACACACTGAAGCTGGGGTTGAGCGTCTGCAGTTCGGTCACTTTTGTGAAGACAGAGAAACGTCCAAAGCTGCTGATCAGCCAATCAGAGCTGTTCTGAGAGATGCCCACACACCCTGCAGTGTTGTTCTGAGAGAGGAAGACTTTGATGAAGTCAACGTAGACGTTAGCTTGAGTATCGTTGGACATGATGTCAAAACTCTGACTGAAGCTCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU597245 lncRNA downstream 6664 405701 ~ 410085 (-) True G520569
TU597239 lncRNA downstream 18641 394529 ~ 398108 (-) True G520565
TU597045 lncRNA downstream 123849 291733 ~ 292900 (-) True G520418
TU597120 lncRNA downstream 125098 280805 ~ 291651 (-) False G520491
TU597124 lncRNA downstream 126221 289764 ~ 290528 (-) True G520491
CI01000365_00326334_00327173.mRNA mRNA downstream 89149 326075 ~ 327600 (-) True CI01000365_00326334_00327173
CI01000365_00215623_00216039.mRNA mRNA downstream 198360 214868 ~ 218389 (-) True CI01000365_00215623_00216039
CI01000365_00102657_00113817.mRNA mRNA downstream 302757 102430 ~ 113992 (-) True CI01000365_00102657_00113817
CI01000365_00096865_00101128.mRNA mRNA downstream 314565 96541 ~ 102184 (-) True CI01000365_00096865_00101128
CI01000365_00040221_00045449.mRNA mRNA downstream 371300 39830 ~ 45449 (-) True CI01000365_00040221_00045449
CI01000365_00436141_00445601.mRNA mRNA upstream 17102 435438 ~ 445601 (-) True CI01000365_00436141_00445601
TU597227 other downstream 39091 376165 ~ 377658 (-) True G520557

Expression Profile