RNA id: TCONS_00001693


Basic Information

Item Value
RNA id TCONS_00001693
length 124
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_001051
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 11062524 ~ 11062647 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCAACAGCTAGCActttgcaactctcacatggtcgcctacttgaagctaagcagggctgtgccctgTGCTCCTTACAGTacctggattggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000166570

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00003343 lncRNA downstream 124709 10936724 ~ 10937815 (-) True XLOC_001050
TCONS_00001690 lncRNA downstream 177186 10873017 ~ 10885338 (-) False XLOC_001048
TCONS_00003342 lncRNA downstream 322083 10739165 ~ 10740441 (-) True XLOC_001045
TCONS_00001676 lncRNA downstream 380375 10671852 ~ 10682149 (-) True XLOC_001044
TCONS_00001651 lncRNA downstream 1081714 9972696 ~ 9980810 (-) False XLOC_001033
TCONS_00003344 lncRNA upstream 408143 11470790 ~ 11517353 (-) True XLOC_001054
TCONS_00003345 lncRNA upstream 630510 11693157 ~ 11695392 (-) True XLOC_001061
TCONS_00003346 lncRNA upstream 648896 11711543 ~ 11714363 (-) True XLOC_001062
TCONS_00001712 lncRNA upstream 877514 11940161 ~ 11973334 (-) True XLOC_001065
TCONS_00001715 lncRNA upstream 1002509 12065156 ~ 12068877 (-) True XLOC_001067
TCONS_00001682 mRNA downstream 148001 10824653 ~ 10914523 (-) False XLOC_001048
TCONS_00001681 mRNA downstream 177185 10824653 ~ 10885339 (-) False XLOC_001048
TCONS_00001688 mRNA downstream 177255 10853315 ~ 10885269 (-) False XLOC_001048
TCONS_00001685 mRNA downstream 214771 10824751 ~ 10847753 (-) False XLOC_001048
TCONS_00001687 mRNA downstream 221176 10826296 ~ 10841348 (-) False XLOC_001048
TCONS_00001694 mRNA upstream 24310 11086957 ~ 11104805 (-) True XLOC_001052
TCONS_00001695 mRNA upstream 62099 11124746 ~ 11372458 (-) False XLOC_001053
TCONS_00001696 mRNA upstream 62455 11125102 ~ 11291324 (-) False XLOC_001053
TCONS_00001697 mRNA upstream 277387 11340034 ~ 11372456 (-) False XLOC_001053
TCONS_00001698 mRNA upstream 277390 11340037 ~ 11519934 (-) True XLOC_001053
TCONS_00001692 other downstream 153903 10901066 ~ 10908621 (-) True XLOC_001048
TCONS_00001691 other downstream 158638 10893322 ~ 10903886 (-) False XLOC_001048
TCONS_00001689 other downstream 192283 10870117 ~ 10870241 (-) True XLOC_001049
TCONS_00001684 other downstream 212573 10824660 ~ 10849951 (-) False XLOC_001048
TCONS_00001683 other downstream 221146 10824660 ~ 10841378 (-) False XLOC_001048
TCONS_00001733 other upstream 1613340 12675987 ~ 12677715 (-) True XLOC_001074
TCONS_00001743 other upstream 2720283 13782930 ~ 13783046 (-) True XLOC_001082
TCONS_00001744 other upstream 2813158 13875805 ~ 13875921 (-) True XLOC_001083
TCONS_00001748 other upstream 3011660 14074307 ~ 14074375 (-) True XLOC_001085
TCONS_00001757 other upstream 3452798 14515445 ~ 14515539 (-) True XLOC_001094

Expression Profile

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